RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TRGV5A0A0B4J1U4 118 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 NPIPA2E9PIF3 369 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 NPIPA3F8WFD2 350 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 UPK1AO00322 258 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 UGT2B11O75310 529 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 RFPL3SP0C7P2 107 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 AGAP20933 346 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 ELAVL4P26378 380 aaKnown RBP22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 GDF1P27539 372 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 IL12BP29460 328 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 SLC1A6P48664 564 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 CORO7P57737 925 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 MRPS22P82650 360 aaKnown RBP22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 HSPB3Q12988 150 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 MAD2L1Q13257 205 aaPredicted RBP22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 EFR3AQ14156 821 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 ZNHIT3Q15649 155 aaPredicted RBP22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 CES4AQ5XG92 561 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 ANKRD26P1Q6NSI1 321 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 SLC30A6Q6NXT4 461 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 SLC44A2Q8IWA5 706 aaPredicted RBP22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 LIX1Q8N485 282 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 ZNF781Q8N8C0 355 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 ANKRD42Q8N9B4 389 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 SARAFQ96BY9 339 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 SLC35A4Q96G79 324 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 ACSS1Q9NUB1 689 aaPredicted RBP22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 KLRF1Q9NZS2 232 aa22.66■■□□□ 1.22
RAPGEF1-206ENST00000438647 EXPH5Q8NEV8 1989 aa22.65■■□□□ 1.22
RAPGEF1-206ENST00000438647 CELA3AP09093 270 aa22.65■■□□□ 1.22
RAPGEF1-206ENST00000438647 BGNP21810 368 aa22.65■■□□□ 1.22
RAPGEF1-206ENST00000438647 MANFP55145 182 aaKnown RBP22.65■■□□□ 1.22
RAPGEF1-206ENST00000438647 STX3Q13277 289 aa22.65■■□□□ 1.22
RAPGEF1-206ENST00000438647 ART3Q13508 389 aa22.65■■□□□ 1.22
RAPGEF1-206ENST00000438647 NPSR1Q6W5P4 371 aa22.65■■□□□ 1.22
RAPGEF1-206ENST00000438647 ZNF551Q7Z340 670 aaPredicted RBP22.65■■□□□ 1.22
RAPGEF1-206ENST00000438647 CIDECQ96AQ7 238 aaPredicted RBP22.65■■□□□ 1.22
RAPGEF1-206ENST00000438647 OSBPL11Q9BXB4 747 aa22.65■■□□□ 1.22
RAPGEF1-206ENST00000438647 GIMAP2Q9UG22 337 aa22.65■■□□□ 1.22
RAPGEF1-206ENST00000438647 EIF3LQ9Y262 564 aaKnown RBP22.65■■□□□ 1.22
RAPGEF1-206ENST00000438647 TMEM120BA0PK00 339 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 PRAMEF25A6NGN4 478 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 TTC36A6NLP5 189 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 FIGNL2A6NMB9 653 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 SCAMP2O15127 329 aaKnown RBP22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 NME6O75414 186 aaPredicted RBP22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 PSMG1O95456 288 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 FRKP42685 505 aaPredicted RBP22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 RPL14P50914 215 aaKnown RBP22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 SLC18A1P54219 525 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 PNLIPRP2P54317 469 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 ADORA2A-AS1P86434 159 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 PSG6Q00889 435 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 PDCD2Q16342 344 aaPredicted RBP22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 SMU1Q2TAY7 513 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 ZNF385BQ569K4 471 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 IL23RQ5VWK5 629 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 TMEM211Q6ICI0 200 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 C3P1Q6ZMU1 363 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 NATD1Q8N6N6 113 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 NODALQ96S42 347 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 DMRTA2Q96SC8 542 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 ADOQ96SZ5 270 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 C1orf50Q9BV19 199 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 Q9N2J8 555 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 ATAD3AQ9NVI7 634 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 ATP6V1HQ9UI12 483 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 C15orf41Q9Y2V0 281 aa22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 KLF2Q9Y5W3 355 aaPredicted RBP22.64■■□□□ 1.21
RAPGEF1-206ENST00000438647 ADAM10O14672 748 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 TSPAN2O60636 221 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 MAGOHP61326 146 aaKnown RBP22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 CYP27C1Q4G0S4 372 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 GXYLT1Q4G148 440 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 WLSQ5T9L3 541 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 TIGD3Q6B0B8 471 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 LARP4Q71RC2 724 aaKnown RBP eCLIP22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 OR1J4Q8NGS1 313 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 CEP70Q8NHQ1 597 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 NTNG2Q96CW9 530 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 PRPF18Q99633 342 aaKnown RBP22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 ZNF395Q9H8N7 513 aaPredicted RBP22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 TMBIM4Q9HC24 238 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 NKIRAS1Q9NYS0 192 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 HAO1Q9UJM8 370 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 MRTO4Q9UKD2 239 aaKnown RBP22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 ACAD8Q9UKU7 415 aa22.63■■□□□ 1.21
RAPGEF1-206ENST00000438647 PCNX1Q96RV3 2341 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 ICOSLGO75144 302 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 PRPS1L1P21108 318 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 EMX2Q04743 252 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 CASP8Q14790 479 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 PTGR1Q14914 329 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 MLC1Q15049 377 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 FNDC7Q5VTL7 733 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 DESI1Q6ICB0 168 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 NEIL3Q8TAT5 605 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 DTNBP1Q96EV8 351 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 GNRHR2Q96P88 292 aa22.62■■□□□ 1.21
RAPGEF1-206ENST00000438647 SORT1Q99523 831 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms