RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 GRAMD2AQ8IUY3 354 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 SAMD14Q8IZD0 417 aaPredicted RBP7.08□□□□□ -1.28
VPS50-204ENST00000438395 ZNF615Q8N8J6 731 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 NAXEQ8NCW5 288 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 FAM83FQ8NEG4 500 aaPredicted RBP7.08□□□□□ -1.28
VPS50-204ENST00000438395 RDH11Q8TC12 318 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 SELENOMQ8WWX9 145 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 UCN3Q969E3 161 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 TMCO6Q96DC7 493 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 OMA1Q96E52 524 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 LCORQ96JN0 433 aaPredicted RBP7.08□□□□□ -1.28
VPS50-204ENST00000438395 SFXN2Q96NB2 322 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 ZFP3Q96NJ6 502 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 SH3GL2Q99962 352 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 NTMT1Q9BV86 223 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 SFXN3Q9BWM7 321 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 RBM24Q9BX46 236 aaKnown RBP7.08□□□□□ -1.28
VPS50-204ENST00000438395 CXXC4Q9H2H0 198 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 MRPL46Q9H2W6 279 aaKnown RBP7.08□□□□□ -1.28
VPS50-204ENST00000438395 UBQLN3Q9H347 655 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 CALHM2Q9HA72 323 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 PROK2Q9HC23 129 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 TAS2R10Q9NYW0 307 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 EHD3Q9NZN3 535 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 PCTPQ9UKL6 214 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 CBLCQ9ULV8 474 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 NFU1Q9UMS0 254 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 EIF3LQ9Y262 564 aaKnown RBP7.08□□□□□ -1.28
VPS50-204ENST00000438395 PCDHA9Q9Y5H5 950 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 ZFHX3Q15911 3703 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 PHF3Q92576 2039 aaKnown RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 SCO2A0A1W2PP80 73 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 GNG14A0A1W2PPG7 69 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 A0A1W2PS29 197 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 CCDC151A5D8V7 595 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 MBD3L4A6NDZ8 208 aaPredicted RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 MBD3L3A6NE82 208 aaPredicted RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 A6NHS1 94 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 MBD3L5A6NJ08 208 aaPredicted RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 OR7A17O14581 309 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 REM1O75628 298 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 CBR3O75828 277 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 BCAS2O75934 225 aaPredicted RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 IL18BPO95998 194 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 CLPSP04118 112 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 ATP1B1P05026 303 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 CT62P0C5K7 136 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 COL6A2P12110 1019 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 TAC1P20366 129 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 PTPN6P29350 595 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 HMOX2P30519 316 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 CPOXP36551 454 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 AGFG1P52594 562 aaKnown RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 ZNF136P52737 540 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 ETF1P62495 437 aaKnown RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 EEF1A1P68104 462 aaKnown RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 SLC7A5Q01650 507 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 GUCY2DQ02846 1103 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 EFR3AQ14156 821 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 EXOSC7Q15024 291 aaKnown RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 DAZAP2Q15038 168 aaPredicted RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 GGTA1PQ4G0N0 100 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 NHSL2Q5HYW2 709 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 LGSNQ5TDP6 509 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 EEF1A1P5Q5VTE0 462 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 SEM1Q6ZVN7 128 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 P4HA3Q7Z4N8 544 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 LUZP2Q86TE4 346 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 METTL4Q8N3J2 472 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 C1orf52Q8N6N3 182 aaKnown RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 GBP7Q8N8V2 638 aaPredicted RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 OR4F6Q8NGB9 312 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 OR4K17Q8NGC6 315 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 OR52R1Q8NGF1 315 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 MBD3L2Q8NHZ7 208 aaPredicted RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 TRPC4APQ8TEL6 797 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 ADIPOR1Q96A54 375 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 COL21A1Q96P44 957 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 MRPL57Q9BQC6 102 aaKnown RBP7.07□□□□□ -1.28
VPS50-204ENST00000438395 ITPAQ9BY32 194 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 EPB41L4BQ9H329 900 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 PIGMQ9H3S5 423 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 BRF2Q9HAW0 419 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 GALNT9Q9HCQ5 603 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 NINJ2Q9NZG7 142 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 MAT2BQ9NZL9 334 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 NDRG3Q9UGV2 375 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 UTS2RQ9UKP6 389 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 STK38LQ9Y2H1 464 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 PLLPQ9Y342 182 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 OR10H1Q9Y4A9 318 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 JMJD1CQ15652 2540 aa7.07□□□□□ -1.28
VPS50-204ENST00000438395 PRRC2AP48634 2157 aaKnown RBP7.06□□□□□ -1.28
VPS50-204ENST00000438395 SH3D21A4FU49 640 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 FRG2CA6NGY1 282 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 TRIM49D1C9J1S8 452 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 POC1B-GALNT4F8VUJ3 575 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 ARHGEF9O43307 516 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 ICOSLGO75144 302 aa7.06□□□□□ -1.28
VPS50-204ENST00000438395 SMNDC1O75940 238 aaKnown RBP eCLIP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms