RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 FAM163BP0C2L3 166 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 OSMP13725 252 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 CPT2P23786 658 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 RAB40BQ12829 278 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 BLOC1S3Q6QNY0 202 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 TMIGD1Q6UXZ0 262 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 OR4K1Q8NGD4 311 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 C16orf78Q8WTQ4 265 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 SPOCK3Q9BQ16 436 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 OARD1Q9Y530 152 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 TECPR2O15040 1411 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 NPIPA2E9PIF3 369 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 NPIPA3F8WFD2 350 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 ARVCFO00192 962 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 GDF10P55107 478 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 GALK2Q01415 458 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 MSMO1Q15800 293 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 TSSK4Q6SA08 328 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 LYSMD3Q7Z3D4 306 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 TSSK2Q96PF2 358 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 HIPK2Q9H2X6 1198 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 DZANK1Q9NVP4 752 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 OR6C2Q9NZP2 312 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 HBG1P69891 147 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 HBG2P69892 147 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 PLPP4Q5VZY2 271 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 LRRTM4Q86VH4 590 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 C15orf54Q8N8G6 183 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 OR5W2Q8NH69 310 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 MUL1Q969V5 352 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 RSPRY1Q96DX4 576 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 HRH4Q9H3N8 390 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 INTS6Q9UL03 887 aaKnown RBP11□□□□□ -0.65
PTCH1-209ENST00000437951 BACE2Q9Y5Z0 518 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 AGLP35573 1532 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 LALBAP00709 142 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 CD48P09326 243 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 PTBP1P26599 531 aaKnown RBP eCLIP11□□□□□ -0.653e-8■■■■□ 20.8
PTCH1-209ENST00000437951 PLGLB1Q02325 96 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 ZMAT1Q5H9K5 638 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 OR6V1Q8N148 313 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 DPF1Q92782 380 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 WRAP53Q9BUR4 548 aaKnown RBP11□□□□□ -0.65
PTCH1-209ENST00000437951 C2orf42Q9NWW7 574 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 ARHGAP23Q9P227 1491 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 CYTIPO60759 359 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 CLIC3O95833 236 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 SERPINE2P07093 398 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 CD53P19397 219 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 MFGE8Q08431 387 aaPredicted RBP11□□□□□ -0.65
PTCH1-209ENST00000437951 SULF2Q8IWU5 870 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 SLC35F3Q8IY50 421 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 KCNRGQ8N5I3 272 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 TXNDC5Q8NBS9 432 aaKnown RBP11□□□□□ -0.65
PTCH1-209ENST00000437951 RCBTB1Q8NDN9 531 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 OR2A12Q8NGT7 310 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 ADAMTS16Q8TE57 1224 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 WDR18Q9BV38 432 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 MRIQ9BWK5 157 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 B3GNT5Q9BYG0 378 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 NOX3Q9HBY0 568 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 WIF1Q9Y5W5 379 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 B3GALT1Q9Y5Z6 326 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 PDGFAP04085 211 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 CNR1P21554 472 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 SP2Q02086 613 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 SIRPB2Q5JXA9 342 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 FAM205BPQ63HN1 556 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 NOXRED1Q6NXP6 359 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 C1orf123Q9NWV4 160 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 EXO1Q9UQ84 846 aaKnown RBP10.99□□□□□ -0.65
PTCH1-209ENST00000437951 SLC22A14Q9Y267 594 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 A0A1B0GV50 99 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 SOX1O00570 391 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-209ENST00000437951 ACTL6BO94805 426 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 BDH1Q02338 343 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 ZNF74Q16587 644 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 ZNF454Q8N9F8 522 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 SMPDL3BQ92485 455 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 PSMG2Q969U7 264 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 MRPL42Q9Y6G3 142 aaKnown RBP10.99□□□□□ -0.65
PTCH1-209ENST00000437951 C10orf71Q711Q0 1435 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 CD300LBA8K4G0 201 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 STBD1O95210 358 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 FGF3P11487 239 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-209ENST00000437951 GALNT1Q10472 559 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-209ENST00000437951 TCEAL1Q15170 157 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 SOHLH1Q5JUK2 328 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 MRPL10Q7Z7H8 261 aaKnown RBP10.99□□□□□ -0.65
PTCH1-209ENST00000437951 OR4M1Q8NGD0 313 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 OR4K14Q8NGD5 310 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 GAREM1Q9H706 876 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 IL36AQ9UHA7 158 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 SMLR1H3BR10 107 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 ARHGAP33O14559 1287 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 ARPC1BO15143 372 aaKnown RBP10.99□□□□□ -0.65
PTCH1-209ENST00000437951 FBXO48Q5FWF7 155 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 KIAA0319Q5VV43 1072 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 SLC51BQ86UW2 128 aa10.99□□□□□ -0.65
PTCH1-209ENST00000437951 OR9A4Q8NGU2 314 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms