RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 KIF17Q9P2E2 1029 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 FBXO4Q9UKT5 387 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 CDC14AQ9UNH5 594 aa19.71■□□□□ 0.75
PTPRF-207ENST00000436724 A0A087WV62 115 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 DUXAA6NLW8 204 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 CTNSO60931 367 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 RHCEP18577 417 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 HPCAP84074 193 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 HEPHL1Q6MZM0 1159 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 TCTN3Q6NUS6 607 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 DEF8Q6ZN54 512 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 PRSS42Q7Z5A4 293 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF605Q86T29 641 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 CARFQ8N187 725 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 RCBTB1Q8NDN9 531 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF675Q8TD23 568 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 RASSF5Q8WWW0 418 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 C12orf43Q96C57 262 aaKnown RBP19.7■□□□□ 0.74
PTPRF-207ENST00000436724 CXorf21Q9HAI6 301 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 RLIMQ9NVW2 624 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 LIPT1Q9Y234 373 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 MRPS33Q9Y291 106 aaKnown RBP19.7■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF701M0R085 212 aaPredicted RBP19.7■□□□□ 0.74
PTPRF-207ENST00000436724 PCDH17O14917 1159 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF749O43361 778 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 CBX7O95931 251 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 DUSP8Q13202 625 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 NIPAL1Q6NVV3 410 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 PRR23CQ6ZRP0 262 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 VRK2Q86Y07 508 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF595Q8IYB9 648 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 VWA5B2Q8N398 1253 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 PIK3R3Q92569 461 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 YIPF2Q9BWQ6 316 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 BTBD2Q9BX70 525 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 SYNDIG1Q9H7V2 258 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 GMEB2Q9UKD1 530 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 ORC6Q9Y5N6 252 aa19.7■□□□□ 0.74
PTPRF-207ENST00000436724 DSPPQ9NZW4 1301 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 H0YIG0 161 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 EPHA2P29317 976 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 HLCSP50747 726 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 RAD23AP54725 363 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 CCL7P80098 99 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 FAHD1Q6P587 224 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 KCTD8Q6ZWB6 473 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 PIK3C3Q8NEB9 887 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 RBM18Q96H35 190 aaKnown RBP19.69■□□□□ 0.74
PTPRF-207ENST00000436724 FEVQ99581 238 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 RIBC2Q9H4K1 309 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF768Q9H5H4 540 aaKnown RBP19.69■□□□□ 0.74
PTPRF-207ENST00000436724 POLR1BQ9H9Y6 1135 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 FGF21Q9NSA1 209 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 ADAMTS20P59510 1910 aa19.69■□□□□ 0.74
PTPRF-207ENST00000436724 CLDN4O14493 209 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 GADD45GO95257 159 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 RPLP0P05388 317 aaKnown RBP19.68■□□□□ 0.74
PTPRF-207ENST00000436724 ELK4P28324 431 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 EMP3P54852 163 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 RAB39AQ14964 217 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 TMEM71Q6P5X7 295 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 FRRS1Q6ZNA5 592 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 GALNT12Q8IXK2 581 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 SLC5A8Q8N695 610 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF555Q8NEP9 628 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 OR9Q2Q8NGE9 314 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 OR52R1Q8NGF1 315 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 GIPC3Q8TF64 312 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 RIT1Q92963 219 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 GTPBP2Q9BX10 602 aaKnown RBP19.68■□□□□ 0.74
PTPRF-207ENST00000436724 KRT84Q9NSB2 600 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 LOC100130705A0A1B0GUX0 176 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 PNLIPP16233 465 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 S1PR1P21453 382 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 EPS8Q12929 822 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF311Q5JNZ3 666 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 TTC23Q5W5X9 447 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 TSPYL5Q86VY4 417 aaPredicted RBP19.68■□□□□ 0.74
PTPRF-207ENST00000436724 GPR135Q8IZ08 494 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 ZNF501Q96CX3 271 aaPredicted RBP19.68■□□□□ 0.74
PTPRF-207ENST00000436724 SPATA5L1Q9BVQ7 753 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 PIGUQ9H490 435 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 FBXO34Q9NWN3 711 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 CHST2Q9Y4C5 530 aa19.68■□□□□ 0.74
PTPRF-207ENST00000436724 FRS3O43559 492 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 SSTR4P31391 388 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 LIMS1P48059 325 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 PRAMEF8Q5VWM4 474 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 PRAMEF7Q5VXH5 474 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 DHRS4L2Q6PKH6 230 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 OR10G2Q8NGC3 310 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 OR6T1Q8NGN1 323 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 PHF10Q8WUB8 498 aaKnown RBP19.67■□□□□ 0.74
PTPRF-207ENST00000436724 NMNAT1Q9HAN9 279 aaPredicted RBP19.67■□□□□ 0.74
PTPRF-207ENST00000436724 NECTIN3Q9NQS3 549 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 GPR55Q9Y2T6 319 aaPredicted RBP19.67■□□□□ 0.74
PTPRF-207ENST00000436724 PCDHGA8Q9Y5G5 932 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 ASCC3Q8N3C0 2202 aaKnown RBP19.67■□□□□ 0.74
PTPRF-207ENST00000436724 CENPVL1A0A0U1RR11 272 aa19.67■□□□□ 0.74
PTPRF-207ENST00000436724 CLDN24A6NM45 220 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms