RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 SNTA1Q13424 505 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 SF3B4Q15427 424 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTPN7-203ENST00000435759 PLCZ1Q86YW0 608 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 CHDHQ8NE62 594 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-203ENST00000435759 METTL6Q8TCB7 284 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 C16orf78Q8WTQ4 265 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 LRRC46Q96FV0 321 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 KCNA7Q96RP8 456 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 FAIM2Q9BWQ8 316 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 RBM24Q9BX46 236 aaKnown RBP12.38□□□□□ -0.43
PTPN7-203ENST00000435759 ACPTQ9BZG2 426 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 PFDN4Q9NQP4 134 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 DLL4Q9NR61 685 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 PRODH2Q9UF12 536 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 TRPS1Q9UHF7 1281 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 FOXD3Q9UJU5 478 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-203ENST00000435759 ZNF180Q9UJW8 692 aa12.38□□□□□ -0.43
PTPN7-203ENST00000435759 RPH3AQ9Y2J0 694 aaPredicted RBP12.38□□□□□ -0.43
PTPN7-203ENST00000435759 OR6C70A6NIJ9 312 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 CLCA1A8K7I4 914 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 H0Y3Z8 333 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 PLOD2O00469 737 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 CDH16O75309 829 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 ULK1O75385 1050 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 SNRPAP09012 282 aaKnown RBP12.37□□□□□ -0.43
PTPN7-203ENST00000435759 RHOXF2BP0C7M4 288 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 PEX19P40855 299 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 CLDN15P56746 228 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 B3GALT5-AS1P59052 145 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 RCAN2Q14206 197 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 TIFABQ6ZNK6 161 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 KIF18BQ86Y91 864 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 GCNT2Q8N0V5 402 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 WFDC11Q8NEX6 87 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 OR7G2Q8NG99 324 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 WNT2BQ93097 391 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 EFHD2Q96C19 240 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-203ENST00000435759 TMCO6Q96DC7 493 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 MBD6Q96DN6 1003 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 VSTM2LQ96N03 204 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 BTBD9Q96Q07 612 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 TMEM237Q96Q45 408 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 UCN2Q96RP3 112 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 SMR3AQ99954 134 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 EBPLQ9BY08 206 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 RTN4RQ9BZR6 473 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 NMRK1Q9NWW6 199 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 GALNT8Q9NY28 637 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 FLRT3Q9NZU0 649 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 MCM8Q9UJA3 840 aa12.37□□□□□ -0.43
PTPN7-203ENST00000435759 ARHGAP21Q5T5U3 1957 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 H0YC42 278 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 GOLGA8RI6L899 631 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 UBFD1O14562 309 aaKnown RBP12.36□□□□□ -0.43
PTPN7-203ENST00000435759 PCDH7O60245 1069 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 HRGP04196 525 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 DRD2P14416 443 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 IMPDH1P20839 514 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 FOXA1P55317 472 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 TPD52P55327 224 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-203ENST00000435759 CLDN18P56856 261 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 PPP2R2AP63151 447 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 FAM27E3Q08E93 113 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 DEFB113Q30KQ7 82 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 KRTAP21-3Q3LHN1 58 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 FBXW10Q5XX13 1052 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 PAMR1Q6UXH9 720 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 GPRIN3Q6ZVF9 776 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 LARP4Q71RC2 724 aaKnown RBP eCLIP12.36□□□□□ -0.43
PTPN7-203ENST00000435759 SLC44A2Q8IWA5 706 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-203ENST00000435759 OR5M1Q8NGP8 315 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 ZNF675Q8TD23 568 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 RNF138Q8WVD3 245 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 C11orf24Q96F05 449 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-203ENST00000435759 SLC35A4Q96G79 324 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 C16orf45Q96MC5 204 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-203ENST00000435759 ALPK1Q96QP1 1244 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 FMO2Q99518 471 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 FOLH1BQ9HBA9 442 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 SLC35C2Q9NQQ7 365 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 CLCF1Q9UBD9 225 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 NAV3Q8IVL0 2385 aa12.36□□□□□ -0.43
PTPN7-203ENST00000435759 FLNAP21333 2647 aaKnown RBP12.36□□□□□ -0.43
PTPN7-203ENST00000435759 A0A087WUV0 522 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-203ENST00000435759 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 GNG14A0A1W2PPG7 69 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 A8MXE2 369 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 ERN1O75460 977 aaKnown RBP12.35□□□□□ -0.43
PTPN7-203ENST00000435759 TNFSF13O75888 250 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 KRT6AP02538 564 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 RAF1P04049 648 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 KRT6BP04259 564 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 GRK2P25098 689 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 SRD5A2P31213 254 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 KRT6CP48668 564 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 PRKAA2P54646 552 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 SORDQ00796 357 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 KEAP1Q14145 624 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 RASA2Q15283 850 aa12.35□□□□□ -0.43
PTPN7-203ENST00000435759 WHAMMP3Q1A5X7 153 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms