RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 COMTD1Q86VU5 262 aa10.45□□□□□ -0.74
SEMA4D-209ENST00000429836 LRRC28Q86X40 367 aaPredicted RBP10.45□□□□□ -0.74
SEMA4D-209ENST00000429836 FGF11Q92914 225 aa10.45□□□□□ -0.74
SEMA4D-209ENST00000429836 SUSD3Q96L08 255 aa10.45□□□□□ -0.74
SEMA4D-209ENST00000429836 REEP4Q9H6H4 257 aa10.45□□□□□ -0.74
SEMA4D-209ENST00000429836 CFAP97Q9P2B7 532 aa10.45□□□□□ -0.74
SEMA4D-209ENST00000429836 LIPT1Q9Y234 373 aa10.45□□□□□ -0.74
SEMA4D-209ENST00000429836 NOD1Q9Y239 953 aa10.45□□□□□ -0.74
SEMA4D-209ENST00000429836 PRELID3BQ9Y3B1 194 aa10.45□□□□□ -0.74
SEMA4D-209ENST00000429836 RNF215Q9Y6U7 377 aa10.45□□□□□ -0.74
SEMA4D-209ENST00000429836 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 TRBV5-4A0A0C4DH59 114 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 C17orf102A2RUQ5 167 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 OR5K4A6NMS3 321 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 A8MXK9 166 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 CHURC1-FNTBB4DL54 471 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 C5orf58C9J3I9 102 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 KRBOX1C9JBD0 128 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 M0R3H8 397 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 SEPT4O43236 478 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 PRODHO43272 600 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 MTX2O75431 263 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 KDM4BO94953 1096 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 HNF1BP35680 557 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 CDH4P55283 916 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 GPR17Q13304 367 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 ZNF177Q13360 481 aaPredicted RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 IGSF11Q5DX21 431 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 EOGTQ5NDL2 527 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 REEP3Q6NUK4 255 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 OAFQ86UD1 273 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 THOC6Q86W42 341 aaKnown RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 LMNTD1Q8N9Z9 388 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 GPR26Q8NDV2 337 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 ADAMTS19Q8TE59 1207 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 SLC38A5Q8WUX1 472 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 ADAMTS14Q8WXS8 1223 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 ATOH1Q92858 354 aaPredicted RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 PARK7Q99497 189 aaKnown RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 GULP1Q9UBP9 304 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 DNASE2O00115 360 aaPredicted RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 TFP02787 698 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 WNT1P04628 370 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 URODP06132 367 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 SRPRAP08240 638 aaKnown RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 F8A1P23610 371 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 ATP5A1P25705 553 aaKnown RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 ACSL1P33121 698 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 NAE1Q13564 534 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 MRPL58Q14197 206 aaKnown RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 C6orf132Q5T0Z8 1188 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 SFRP4Q6FHJ7 346 aaPredicted RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 HORMAD2Q8N7B1 307 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 TRPV1Q8NER1 839 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 OR4K5Q8NGD3 323 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 CNOT9Q92600 299 aaKnown RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 PPCDCQ96CD2 204 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 GIMAP5Q96F15 307 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 TMEM19Q96HH6 336 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 UBL7Q96S82 380 aaPredicted RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 DPH7Q9BTV6 452 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 BHLHE41Q9C0J9 482 aaPredicted RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 ISG20L2Q9H9L3 353 aaKnown RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 ISYNA1Q9NPH2 558 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 GPR160Q9UJ42 338 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 EXOSC1Q9Y3B2 195 aaKnown RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 ARPC4-TTLL3A0A0A6YYG9 625 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 A0A0B4J203 849 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 SERTM1A2A2V5 107 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 L7N2F9 121 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 RFX3P48380 749 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 HNMTP50135 292 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 GPR85P60893 370 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 MLLT1Q03111 559 aaPredicted RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 TLE2Q04725 743 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 CCSMST1Q4G0I0 132 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 LIPJQ5W064 366 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 FAM198BQ6UWH4 519 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 SLC36A4Q6YBV0 504 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 LINC00469Q8N7U9 141 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 GOT1L1Q8NHS2 421 aaPredicted RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 YIPF5Q969M3 257 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 C12orf57Q99622 126 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 SEPT5Q99719 369 aaPredicted RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 DPYSL5Q9BPU6 564 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 SLC6A15Q9H2J7 730 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 CD93Q9NPY3 652 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 PFDN2Q9UHV9 154 aa10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 SIRT4Q9Y6E7 314 aaPredicted RBP10.44□□□□□ -0.74
SEMA4D-209ENST00000429836 TDRD15B5MCY1 1934 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-209ENST00000429836 ANXA2P2A6NMY6 339 aa10.43□□□□□ -0.74
SEMA4D-209ENST00000429836 INPPL1O15357 1258 aa10.43□□□□□ -0.74
SEMA4D-209ENST00000429836 SMAD6O43541 496 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-209ENST00000429836 GPR37L1O60883 481 aa10.43□□□□□ -0.74
SEMA4D-209ENST00000429836 SIX6O95475 246 aa10.43□□□□□ -0.74
SEMA4D-209ENST00000429836 IRF1P10914 325 aa10.43□□□□□ -0.74
SEMA4D-209ENST00000429836 RBMS1P29558 406 aaKnown RBP10.43□□□□□ -0.74
SEMA4D-209ENST00000429836 THBS2P35442 1172 aa10.43□□□□□ -0.74
SEMA4D-209ENST00000429836 MAZP56270 477 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms