RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 FAM131AQ6UXB0 335 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 SLC36A4Q6YBV0 504 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 MRGPREQ86SM8 312 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 RAB43Q86YS6 212 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 CCDC116Q8IYX3 515 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 ARL6IP6Q8N6S5 226 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 OR8D4Q8NGM9 314 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 SLC9A6Q92581 669 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 CAMK1GQ96NX5 476 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 SAP130Q9H0E3 1048 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 OSGEPL1Q9H4B0 414 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 GPR52Q9Y2T5 361 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 SF3B6Q9Y3B4 125 aaKnown RBP12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 A0A1W2PQL4 384 aaPredicted RBP12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 LRRTM2O43300 516 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 ERI3O43414 337 aaKnown RBP12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 LATO43561 262 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 HOXB3P14651 431 aaPredicted RBP12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 HIST1H1TP22492 207 aaPredicted RBP12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 SDC2P34741 201 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 DRD3P35462 400 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 SLC9A3P48764 834 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 RAB28P51157 221 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 TAS2R41P59536 307 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 ARPC4P59998 168 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 TPBGQ13641 420 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 TAB1Q15750 504 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 MRM1Q6IN84 353 aaKnown RBP12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 TMEM107Q6UX40 140 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 GATAD2BQ8WXI9 593 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 MS4A6EQ96DS6 147 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 KCTD7Q96MP8 289 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 TEX101Q9BY14 249 aa12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 IMP3Q9NV31 184 aaKnown RBP12.51□□□□□ -0.41
SNRNP200-202ENST00000429650 A0A1W2PS29 197 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 IRGMA1A4Y4 181 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 TBC1D3BA6NDS4 549 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 PRSS47A8MTI9 375 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 UBXN7O94888 489 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 PCDH8O95206 1070 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 C8orf89P0DMQ9 161 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 SCN1BQ07699 218 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 DUSP6Q16828 381 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 MINDY4Q4G0A6 757 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 FAM78AQ5JUQ0 283 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 XKRXQ6PP77 449 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 HSDL2Q6YN16 418 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 PRICKLE2Q7Z3G6 844 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 ACOT4Q8N9L9 421 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 SYT14Q8NB59 555 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 SP7Q8TDD2 431 aaPredicted RBP12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 GNPDA2Q8TDQ7 276 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 C1GALT1C1Q96EU7 318 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 PAWRQ96IZ0 340 aaKnown RBP12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 MED18Q9BUE0 208 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 PRDM7Q9NQW5 492 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 MDC1Q14676 2089 aaKnown RBP12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 FAM170BA6NMN3 283 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 SNTNA6NMZ2 147 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 FRS3O43559 492 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 AIFM1O95831 613 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 FHP07954 510 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 PKLRP30613 574 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 MTNR1AP48039 350 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 TSPAN31Q12999 210 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 ZNF311Q5JNZ3 666 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 PRAMEF8Q5VWM4 474 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 PRAMEF7Q5VXH5 474 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 ABHD17CQ6PCB6 329 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 QSOX2Q6ZRP7 698 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 OR56A1Q8NGH5 318 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 TP53INP1Q96A56 240 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 DIRAS2Q96HU8 199 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 TM9SF2Q99805 663 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 ARHGDIGQ99819 225 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 KATNB1Q9BVA0 655 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 SLC38A1Q9H2H9 487 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 WDR26Q9H7D7 661 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 SLC6A20Q9NP91 592 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 ISYNA1Q9NPH2 558 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 CNIH4Q9P003 139 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 ENTPD4Q9Y227 616 aa12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 GPR55Q9Y2T6 319 aaPredicted RBP12.5□□□□□ -0.41
SNRNP200-202ENST00000429650 FABP12A6NFH5 140 aa12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 KDM4EB2RXH2 506 aaPredicted RBP12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 SYT5O00445 386 aa12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 SLC30A4O14863 429 aa12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 RGS13O14921 159 aa12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 NTN1O95631 604 aa12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 CSF3P09919 207 aa12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 TCEA1P23193 301 aaKnown RBP12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 ATP5A1P25705 553 aaKnown RBP12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 MAP4K2Q12851 820 aa12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 ASAH1Q13510 395 aa12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 CRTC2Q53ET0 693 aaPredicted RBP12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 DDI2Q5TDH0 399 aa12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 AGBL4Q5VU57 503 aa12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 C18orf63Q68DL7 685 aa12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 SHFQ7M4L6 423 aa12.49□□□□□ -0.41
SNRNP200-202ENST00000429650 C11orf74Q86VG3 221 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms