RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 SCML2Q9UQR0 700 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 RNF11Q9Y3C5 154 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 RAI2Q9Y5P3 530 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 FADS3Q9Y5Q0 445 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 SNX5Q9Y5X3 404 aa4.72□□□□□ -1.65
LINC00458-202ENST00000427299 PLXNA2O75051 1894 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 IGLV3-10A0A075B6K4 115 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 A0A1B0GVG6 124 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 NEMP2A6NFY4 417 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 ARL5CA6NH57 179 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 CASTOR2A6NHX0 329 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 C2orf81A6NN90 581 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 E5RI56 91 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 F5H5T6 163 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 H3BMM5 538 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 H3BMQ9 156 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 TMEM189-UBE2V1I3L0A0 370 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 KPNA4O00629 521 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 MRPS14O60783 128 aaKnown RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 PAGE4O60829 102 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 NDUFS3O75489 264 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 SLC22A3O75751 556 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 CDK14O94921 469 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 ZBTB11O95625 1053 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 BCL10O95999 233 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 SLC4A1P02730 911 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 PRSS2P07478 247 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 EDN2P20800 178 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 JAK1P23458 1154 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 EEF1B2P24534 225 aaKnown RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 EEF1DP29692 281 aaKnown RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 MAGEA11P43364 429 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 GPR12P47775 334 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 RGS4P49798 205 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 GSK3BP49841 420 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 POLR2JP52435 117 aaKnown RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 RAD23AP54725 363 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 C21orf59P57076 290 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 ZP1P60852 638 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 SEC61A1P61619 476 aaKnown RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 OLR1P78380 273 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 CHRNB3Q05901 458 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 DSC1Q08554 894 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 SMARCB1Q12824 385 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 GRSF1Q12849 480 aaKnown RBP eCLIP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 AIMP2Q13155 320 aaKnown RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 ZNF846Q147U1 533 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 C16orf72Q14CZ0 275 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 PPP1R3AQ16821 1122 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 RGS21Q2M5E4 152 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 ZNF718Q3SXZ3 478 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 CCDC92Q53HC0 331 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 UNC50Q53HI1 259 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 SIRPB2Q5JXA9 342 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 DCAF12L2Q5VW00 463 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 NIPAL1Q6NVV3 410 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 TMEM71Q6P5X7 295 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 KCTD8Q6ZWB6 473 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 GLT6D1Q7Z4J2 308 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 PTAR1Q7Z6K3 402 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 DNAJB7Q7Z6W7 309 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 ISCA2Q86U28 154 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 GPAT4Q86UL3 456 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 ZFAND4Q86XD8 727 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 EID3Q8N140 333 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 CLEC4FQ8N1N0 589 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 FNDC5Q8NAU1 212 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 AVL9Q8NBF6 648 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 TMEM116Q8NCL8 245 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 OR52E4Q8NGH9 312 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 OR9I1Q8NGQ6 314 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 OR4L1Q8NH43 312 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 ITFG1Q8TB96 612 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 BRSK1Q8TDC3 778 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 BLOC1S5Q8TDH9 187 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 TRUB1Q8WWH5 349 aaKnown RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 VPS33AQ96AX1 596 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 TADA1Q96BN2 335 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 AURKBQ96GD4 344 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 ZNF419Q96HQ0 510 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 PPP3R2Q96LZ3 170 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 TRIB3Q96RU7 358 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 GAD1Q99259 594 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 PKMYT1Q99640 499 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 C19orf43Q9BQ61 176 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 MGME1Q9BQP7 344 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 FEM1AQ9BSK4 669 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 MTG1Q9BT17 334 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 B3GNT4Q9C0J1 378 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 RAD21L1Q9H4I0 556 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 RPF2Q9H7B2 306 aaKnown RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 MVB12BQ9H7P6 319 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 GPN2Q9H9Y4 310 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 POLR1BQ9H9Y6 1135 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 CXorf21Q9HAI6 301 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 CCNB1IP1Q9NPC3 277 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 HEBP1Q9NRV9 189 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 NLE1Q9NVX2 485 aaPredicted RBP4.71□□□□□ -1.66
LINC00458-202ENST00000427299 GIN1Q9NXP7 522 aa4.71□□□□□ -1.66
LINC00458-202ENST00000427299 USE1Q9NZ43 259 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms