RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 IL6P05231 212 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 ACP2P11117 423 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 ICAM2P13598 275 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 HOXB9P17482 250 aaPredicted RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 PTPN6P29350 595 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 SOAT1P35610 550 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 CCT3P49368 545 aaKnown RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 CLCN2P51788 898 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 KCNK10P57789 538 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 RPS26P62854 115 aaKnown RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 ZNF155Q12901 538 aaPredicted RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 KCNAB2Q13303 367 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 RCAN2Q14206 197 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 MYBPC3Q14896 1274 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 MLC1Q15049 377 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 DPY19L1Q2PZI1 675 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 SPDYE7PQ495Y7 208 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 ACER2Q5QJU3 275 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 EXOSC6Q5RKV6 272 aaKnown RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 C6orf163Q5TEZ5 329 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 ANXA8L1Q5VT79 327 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 JMJD6Q6NYC1 403 aaPredicted RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 RNF111Q6ZNA4 994 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 OLIG3Q7RTU3 272 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 RPS19BP1Q86WX3 136 aaKnown RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 ZNF227Q86WZ6 799 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 SNX32Q86XE0 403 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 ZDHHC13Q8IUH4 622 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 PRR22Q8IZ63 422 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 BEST3Q8N1M1 668 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 GLB1L3Q8NCI6 653 aaPredicted RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 GALNT11Q8NCW6 608 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 NUP43Q8NFH3 380 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 OR4N2Q8NGD1 307 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 GOT1L1Q8NHS2 421 aaPredicted RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 ZFP28Q8NHY6 868 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 GTF2H4Q92759 462 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 SPDL1Q96EA4 605 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 AURKBQ96GD4 344 aaPredicted RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 VPS50Q96JG6 964 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 ART5Q96L15 291 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 VSTM2LQ96N03 204 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 GAL3ST4Q96RP7 486 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 SLC25A23Q9BV35 468 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 TRIM8Q9BZR9 551 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 WWTR1Q9GZV5 400 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 NXF5Q9H1B4 397 aaKnown RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 SERHL2Q9H4I8 314 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 FOLH1BQ9HBA9 442 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 EQTNQ9NQ60 294 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 ZNF71Q9NQZ8 489 aaPredicted RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 DDX18Q9NVP1 670 aaKnown RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 GPATCH2Q9NW75 528 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 ANKRD10Q9NXR5 420 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 TAS2R9Q9NYW1 312 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 NTMQ9P121 344 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 COPS7AQ9UBW8 275 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 MAPRE3Q9UPY8 281 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 TP53TG5Q9Y2B4 290 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 HEMK1Q9Y5R4 338 aaPredicted RBP5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 KCNE3Q9Y6H6 103 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 CAPN7Q9Y6W3 813 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 SCN2AQ99250 2005 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 PTPRQQ9UMZ3 2332 aa5.28□□□□□ -1.56
HERPUD2-204ENST00000426180 TPRP12270 2363 aaKnown RBP5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 TRBV5-3A0A0A0MS03 114 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 RNF103-CHMP3A0A140T963 221 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 C2orf92A0A1B0GVN3 265 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 A0A1W2PP18 115 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 OR6C76A6NM76 312 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 CAPN14A8MX76 684 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 RFXANKO14593 260 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 PRAMEF2O60811 474 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 CCDC22O60826 627 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 ITGA10O75578 1167 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 SLITRK5O94991 958 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 OR6B1O95007 311 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 IGKV1D-16P01601 117 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 ALPPP05187 535 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 HMGN2P05204 90 aaKnown RBP5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 SNRPB2P08579 225 aaKnown RBP5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 IFI6P09912 130 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 CT45A8P0DMV1 189 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 CT45A9P0DMV2 189 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 COX4I1P13073 169 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 UQCRC2P22695 453 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 CD96P40200 585 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 SOX3P41225 446 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 MAP3K8P41279 467 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 PPICP45877 212 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 MAN2A2P49641 1150 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 NR0B1P51843 470 aaKnown RBP5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 MVDP53602 400 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 IRX1P78414 480 aaPredicted RBP5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 CBX1P83916 185 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 PSG6Q00889 435 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 MFAP5Q13361 173 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 TP53BP2Q13625 1128 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 TUBA3CQ13748 450 aa5.27□□□□□ -1.57
HERPUD2-204ENST00000426180 LY6DQ14210 128 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms