RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SAP130Q9H0E3 1048 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 MTHFD2LQ9H903 347 aaPredicted RBP14.17□□□□□ -0.14
ACTB-204ENST00000425660 PNPLA3Q9NST1 481 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 FAM118AQ9NWS6 357 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 CUL9Q8IWT3 2517 aa14.17□□□□□ -0.14
ACTB-204ENST00000425660 IGKV3D-11A0A0A0MRZ8 115 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 EIF4E1BA6NMX2 242 aaKnown RBP14.16□□□□□ -0.14
ACTB-204ENST00000425660 NKX2-2O95096 273 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 IGFBP5P24593 272 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 PRKAR1BP31321 381 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 EMDP50402 254 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 SPIBQ01892 262 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 FUT7Q11130 342 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 TTC23Q5W5X9 447 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 TYW3Q6IPR3 259 aaKnown RBP14.16□□□□□ -0.14
ACTB-204ENST00000425660 RHBDD2Q6NTF9 364 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 PIK3C3Q8NEB9 887 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 OR4D11Q8NGI4 311 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 PMM1Q92871 262 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 ZG16BQ96DA0 208 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 WFDC6Q9BQY6 131 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 LMF2Q9BU23 707 aaKnown RBP14.16□□□□□ -0.14
ACTB-204ENST00000425660 GTPBP2Q9BX10 602 aaKnown RBP14.16□□□□□ -0.14
ACTB-204ENST00000425660 QRSL1Q9H0R6 528 aaKnown RBP14.16□□□□□ -0.14
ACTB-204ENST00000425660 SOX17Q9H6I2 414 aaPredicted RBP14.16□□□□□ -0.14
ACTB-204ENST00000425660 ZNF304Q9HCX3 659 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 SLC9A8Q9Y2E8 581 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 WDR87Q6ZQQ6 2873 aa14.16□□□□□ -0.14
ACTB-204ENST00000425660 ARRDC5A6NEK1 342 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 OR2W5A6NFC9 320 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 NTN3O00634 580 aaPredicted RBP14.15□□□□□ -0.14
ACTB-204ENST00000425660 SLC16A6O15403 523 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 ALPPP05187 535 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 GUSBP08236 651 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 YAP1P46937 504 aaKnown RBP14.15□□□□□ -0.14
ACTB-204ENST00000425660 CDH12P55289 794 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 PSG6Q00889 435 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 KCNAB2Q13303 367 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 MICAQ29983 383 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 ZIK1Q3SY52 487 aaPredicted RBP14.15□□□□□ -0.14
ACTB-204ENST00000425660 COLEC12Q5KU26 742 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 PLA2G2CQ5R387 149 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 DHRS4L2Q6PKH6 230 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 SLITRK4Q8IW52 837 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 DOK4Q8TEW6 326 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.15□□□□□ -0.14
ACTB-204ENST00000425660 VSTM2LQ96N03 204 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 NECTIN3Q9NQS3 549 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 SIDT1Q9NXL6 827 aaKnown RBP14.15□□□□□ -0.14
ACTB-204ENST00000425660 NDOR1Q9UHB4 597 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 WDR45Q9Y484 360 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 CHST2Q9Y4C5 530 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 PCDHGB2Q9Y5G2 931 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 ORC6Q9Y5N6 252 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 CLIC3O95833 236 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 ITGAMP11215 1152 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 RPS4Y1P22090 263 aaKnown RBP14.15□□□□□ -0.14
ACTB-204ENST00000425660 PIGAP37287 484 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 DAB2P98082 770 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 ZNF311Q5JNZ3 666 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 DCST2Q5T1A1 773 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 LACC1Q8IV20 430 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 RCBTB1Q8NDN9 531 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 GIPC3Q8TF64 312 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 FKBP10Q96AY3 582 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 CCDC74BQ96LY2 380 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 ARRDC1-AS1Q9H2J1 176 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 SMOC1Q9H4F8 434 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 POLE3Q9NRF9 147 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 IFT52Q9Y366 437 aa14.15□□□□□ -0.14
ACTB-204ENST00000425660 HEMK1Q9Y5R4 338 aaPredicted RBP14.15□□□□□ -0.14
ACTB-204ENST00000425660 AGAP5A6NIR3 686 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 HRKO00198 91 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 KHNYNO15037 678 aaKnown RBP14.14□□□□□ -0.15
ACTB-204ENST00000425660 PRAMEF2O60811 474 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 STX11O75558 287 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 GADD45GO95257 159 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 THBS1P07996 1170 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 FBLP22087 321 aaKnown RBP14.14□□□□□ -0.15
ACTB-204ENST00000425660 RORAP35398 523 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 GRK6P43250 576 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 ZC3H14Q6PJT7 736 aaKnown RBP14.14□□□□□ -0.15
ACTB-204ENST00000425660 RBM45Q8IUH3 476 aaKnown RBP14.14□□□□□ -0.15
ACTB-204ENST00000425660 COX18Q8N8Q8 333 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 ATG16L2Q8NAA4 619 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 OR52P1PQ8NH57 321 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 GPR151Q8TDV0 419 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 PTCHD1Q96NR3 888 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 MUS81Q96NY9 551 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 ARHGDIGQ99819 225 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 GRIP2Q9C0E4 1043 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 TRIM45Q9H8W5 580 aaPredicted RBP14.14□□□□□ -0.15
ACTB-204ENST00000425660 NMNAT1Q9HAN9 279 aaPredicted RBP14.14□□□□□ -0.15
ACTB-204ENST00000425660 MKLN1Q9UL63 735 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 A4GNTQ9UNA3 340 aa14.14□□□□□ -0.15
ACTB-204ENST00000425660 LOC100130705A0A1B0GUX0 176 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 D6RAR5 112 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 E9PQ18 207 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 M0R3H8 397 aa14.13□□□□□ -0.15
ACTB-204ENST00000425660 KIAA0513O60268 411 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms