RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SEM1Q6ZVN7 128 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 TRIM46Q7Z4K8 759 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 TMEM200AQ86VY9 491 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 TDRPQ86YL5 185 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 PLCZ1Q86YW0 608 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 TRIM42Q8IWZ5 723 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 WDSUB1Q8N9V3 476 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 FAM83FQ8NEG4 500 aaPredicted RBP8.47□□□□□ -1.05
NUP50-206ENST00000422489 OR7G2Q8NG99 324 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 OR4N2Q8NGD1 307 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 GFM2Q969S9 779 aaKnown RBP8.47□□□□□ -1.05
NUP50-206ENST00000422489 EFHD2Q96C19 240 aaPredicted RBP8.47□□□□□ -1.05
NUP50-206ENST00000422489 WDYHV1Q96HA8 205 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 PPCSQ9HAB8 311 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 TNFRSF12AQ9NP84 129 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 SIRT5Q9NXA8 310 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 TAS2R10Q9NYW0 307 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 PCDHGB3Q9Y5G1 929 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 ITPR2Q14571 2701 aa8.47□□□□□ -1.05
NUP50-206ENST00000422489 DIDO1Q9BTC0 2240 aaKnown RBP8.46□□□□□ -1.05
NUP50-206ENST00000422489 AZIN1O14977 448 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 AKAP10O43572 662 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 SCO2O43819 266 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 PLOD3O60568 738 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 TSPAN2O60636 221 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 COQ9O75208 318 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 SPAG7O75391 227 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 ACTL6AO96019 429 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 LINC00032P0C843 101 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 CT45A8P0DMV1 189 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 CT45A9P0DMV2 189 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 CYP4B1P13584 511 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 IGFBP2P18065 325 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 NTSP30990 170 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 CEACAM8P31997 349 aaPredicted RBP8.46□□□□□ -1.06
NUP50-206ENST00000422489 GPC1P35052 558 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 MC3RP41968 323 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 KIR2DL3P43628 341 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 GSTM5P46439 218 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 PNLIPRP2P54317 469 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 PRKAG1P54619 331 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 MRPS22P82650 360 aaKnown RBP8.46□□□□□ -1.06
NUP50-206ENST00000422489 SLC18A2Q05940 514 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 GAB1Q13480 694 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 RCAN2Q14206 197 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 CT45A2Q5DJT8 189 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 DCST1Q5T197 706 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 LIPMQ5VYY2 423 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 ANKRD26P1Q6NSI1 321 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 NPSR1Q6W5P4 371 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 CDH24Q86UP0 819 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 LACC1Q8IV20 430 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 ZZZ3Q8IYH5 903 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 ACBD4Q8NC06 268 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 NAXEQ8NCW5 288 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 OR4K17Q8NGC6 315 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 FAM76AQ8TAV0 307 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.46□□□□□ -1.06
NUP50-206ENST00000422489 ERP27Q96DN0 273 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 C11orf24Q96F05 449 aaPredicted RBP8.46□□□□□ -1.06
NUP50-206ENST00000422489 LRRC46Q96FV0 321 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 SLC35A4Q96G79 324 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 EGLN2Q96KS0 407 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 VSTM2LQ96N03 204 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 BTBD9Q96Q07 612 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 TREX2Q9BQ50 279 aaPredicted RBP8.46□□□□□ -1.06
NUP50-206ENST00000422489 GATA5Q9BWX5 397 aaPredicted RBP8.46□□□□□ -1.06
NUP50-206ENST00000422489 PRDM14Q9GZV8 571 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 STMN4Q9H169 189 aaPredicted RBP8.46□□□□□ -1.06
NUP50-206ENST00000422489 GLIPR2Q9H4G4 154 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 LRTM1Q9HBL6 345 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 SLC24A3Q9HC58 644 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 MYNNQ9NPC7 610 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 KCNN3Q9UGI6 736 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 MID2Q9UJV3 735 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 DKKL1Q9UK85 242 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 RPH3AQ9Y2J0 694 aaPredicted RBP8.46□□□□□ -1.06
NUP50-206ENST00000422489 WBP11Q9Y2W2 641 aaKnown RBP8.46□□□□□ -1.06
NUP50-206ENST00000422489 PTGDR2Q9Y5Y4 395 aa8.46□□□□□ -1.06
NUP50-206ENST00000422489 CACNA1DQ01668 2161 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 H0Y3Z8 333 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 SYT5O00445 386 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 TRIM13O60858 407 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 RSL1D1O76021 490 aaKnown RBP8.45□□□□□ -1.06
NUP50-206ENST00000422489 CHEK2O96017 543 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 TACR1P25103 407 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 CTSSP25774 331 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 ALDH3A1P30838 453 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 GABRA3P34903 492 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 TIMP3P35625 211 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 CLK3P49761 638 aaKnown RBP8.45□□□□□ -1.06
NUP50-206ENST00000422489 DGKQP52824 942 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 STX5Q13190 355 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 ZNHIT3Q15649 155 aaPredicted RBP8.45□□□□□ -1.06
NUP50-206ENST00000422489 CEBPEQ15744 281 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 GALNTL6Q49A17 601 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 NHSL2Q5HYW2 709 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 NSUN5P2Q63ZY6 315 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 TMEM81Q6P7N7 255 aa8.45□□□□□ -1.06
NUP50-206ENST00000422489 ENPP6Q6UWR7 440 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms