RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 NDRG3Q9UGV2 375 aa7.33□□□□□ -1.24
VIM-202ENST00000421459 ADAM21Q9UKJ8 722 aa7.33□□□□□ -1.24
VIM-202ENST00000421459 PCTPQ9UKL6 214 aa7.33□□□□□ -1.24
VIM-202ENST00000421459 PACSIN3Q9UKS6 424 aa7.33□□□□□ -1.24
VIM-202ENST00000421459 PYCARDQ9ULZ3 195 aa7.33□□□□□ -1.24
VIM-202ENST00000421459 SLC12A4Q9UP95 1085 aa7.33□□□□□ -1.24
VIM-202ENST00000421459 FBN3Q75N90 2809 aa7.33□□□□□ -1.24
VIM-202ENST00000421459 NAV3Q8IVL0 2385 aa7.33□□□□□ -1.24
VIM-202ENST00000421459 ARHGAP21Q5T5U3 1957 aa7.33□□□□□ -1.24
VIM-202ENST00000421459 ESYT3A0FGR9 886 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 SHISA8B8ZZ34 492 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 ARHGEF9O43307 516 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 TSPAN2O60636 221 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 UGDHO60701 494 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 SEMA3DO95025 777 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 ATP1B1P05026 303 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 GSTA2P09210 222 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 CT45A8P0DMV1 189 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 CT45A9P0DMV2 189 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 ZNF708P17019 499 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 CSNK2A2P19784 350 aaPredicted RBP7.32□□□□□ -1.24
VIM-202ENST00000421459 DRD5P21918 477 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 LOXP28300 417 aaPredicted RBP7.32□□□□□ -1.24
VIM-202ENST00000421459 TYK2P29597 1187 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 SRD5A2P31213 254 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 STX2P32856 288 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 KIR2DL2P43627 348 aaPredicted RBP7.32□□□□□ -1.24
VIM-202ENST00000421459 PPICP45877 212 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 GAS1P54826 345 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 NR1H2P55055 460 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 SLC7A5Q01650 507 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 ACKR1Q16570 336 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 PRSS53Q2L4Q9 553 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 CT45A2Q5DJT8 189 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 ZNF628Q5EBL2 1059 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 LETMD1Q6P1Q0 360 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 TMEM81Q6P7N7 255 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 ENPP6Q6UWR7 440 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 P4HA3Q7Z4N8 544 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 MILR1Q7Z6M3 343 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 C1orf52Q8N6N3 182 aaKnown RBP7.32□□□□□ -1.24
VIM-202ENST00000421459 ZNF610Q8N9Z0 462 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 OR9A2Q8NGT5 310 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 EFHD2Q96C19 240 aaPredicted RBP7.32□□□□□ -1.24
VIM-202ENST00000421459 PGM2Q96G03 612 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 ZNF845Q96IR2 970 aaPredicted RBP7.32□□□□□ -1.24
VIM-202ENST00000421459 MARK4Q96L34 752 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 COL21A1Q96P44 957 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 UCN2Q96RP3 112 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 RTN4RQ9BZR6 473 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 PIGMQ9H3S5 423 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 DSN1Q9H410 356 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 PFDN4Q9NQP4 134 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 MED11Q9P086 117 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 ZNF225Q9UK10 706 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 DKKL1Q9UK85 242 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 GPR55Q9Y2T6 319 aaPredicted RBP7.32□□□□□ -1.24
VIM-202ENST00000421459 ZNF337Q9Y3M9 751 aa7.32□□□□□ -1.24
VIM-202ENST00000421459 ABCA2Q9BZC7 2435 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 FN1P02751 2386 aaKnown RBP7.31□□□□□ -1.24
VIM-202ENST00000421459 ZANQ9Y493 2812 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 C1orf226A1L170 272 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 FRG2CA6NGY1 282 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 GOLGA6L10A6NI86 522 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 OR6C70A6NIJ9 312 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 MSTNO14793 375 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 TO15178 435 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 ACOX3O15254 700 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 SEC14L5O43304 696 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 HCRTR2O43614 444 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 SCO2O43819 266 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 GMFGO60234 142 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 OR4F21O95013 312 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 PLAUP00749 431 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 CGAP01215 116 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 THBDP07204 575 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 IL3P08700 152 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 SBK3P0C264 359 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 RHOXF2BP0C7M4 288 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 GRK2P25098 689 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 DPP4P27487 766 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 GCKP35557 465 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 UGT2B10P36537 528 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 CD79BP40259 229 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 MC3RP41968 323 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 DIO3P55073 304 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 CLDN20P56880 219 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 RAE1P78406 368 aaKnown RBP7.31□□□□□ -1.24
VIM-202ENST00000421459 IFT88Q13099 833 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 STX5Q13190 355 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 SNTA1Q13424 505 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 GAB1Q13480 694 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 AAGABQ6PD74 315 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 LARP4Q71RC2 724 aaKnown RBP eCLIP7.31□□□□□ -1.24
VIM-202ENST00000421459 PAGE2Q7Z2X7 111 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 SLC44A2Q8IWA5 706 aaPredicted RBP7.31□□□□□ -1.24
VIM-202ENST00000421459 LRRN4CLQ8ND94 238 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 MAPK1IP1LQ8NDC0 245 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 OR7G2Q8NG99 324 aa7.31□□□□□ -1.24
VIM-202ENST00000421459 TRPC4APQ8TEL6 797 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms