RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 SERHL2Q9H4I8 314 aa11.68□□□□□ -0.54
AC004540.1-205ENST00000420774 DEPPQ9NTK1 212 aa11.68□□□□□ -0.54
AC004540.1-205ENST00000420774 GPATCH2Q9NW75 528 aa11.68□□□□□ -0.54
AC004540.1-205ENST00000420774 MAP10Q9P2G4 905 aa11.68□□□□□ -0.54
AC004540.1-205ENST00000420774 BTNL2Q9UIR0 455 aa11.68□□□□□ -0.54
AC004540.1-205ENST00000420774 TRIM33Q9UPN9 1127 aa11.68□□□□□ -0.54
AC004540.1-205ENST00000420774 NPFFR2Q9Y5X5 522 aa11.68□□□□□ -0.54
AC004540.1-205ENST00000420774 SHANK1Q9Y566 2161 aa11.68□□□□□ -0.54
AC004540.1-205ENST00000420774 GMNCA6NCL1 334 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 SP1P08047 785 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 CD46P15529 392 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 MAP3K8P41279 467 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 NRG3P56975 720 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 DCAF7P61962 342 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 NTRK2Q16620 822 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 DUSP5Q16690 384 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 VPS26BQ4G0F5 336 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 PRAMEF20Q5VT98 475 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 BICRALQ6AI39 1079 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 SLC25A25Q6KCM7 469 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 BLOC1S3Q6QNY0 202 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 PRICKLE2Q7Z3G6 844 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 SPATA21Q7Z572 469 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 SLC34A3Q8N130 599 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 SLC15A4Q8N697 577 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 PSD4Q8NDX1 1056 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 VPS37AQ8NEZ2 397 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 OR56A1Q8NGH5 318 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 OR5D16Q8NGK9 328 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 SFXN5Q8TD22 340 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 HOXB13Q92826 284 aaPredicted RBP11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 EFHD2Q96C19 240 aaPredicted RBP11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 SPDL1Q96EA4 605 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 HSPBAP1Q96EW2 488 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 C5orf34Q96MH7 638 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 TAAR6Q96RI8 345 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 SH2D2AQ9NP31 389 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 SLC52A3Q9NQ40 469 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 ANAPC2Q9UJX6 822 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 PCDHGB4Q9UN71 923 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 NTNG1Q9Y2I2 539 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 OR10H1Q9Y4A9 318 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 CHCHD2Q9Y6H1 151 aaPredicted RBP11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 KCNE3Q9Y6H6 103 aa11.67□□□□□ -0.54
AC004540.1-205ENST00000420774 PINLYPA6NC86 204 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 CCDC154A6NI56 674 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 TTLL8A6PVC2 850 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 B8ZZF3 427 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 TO15178 435 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 ACOX3O15254 700 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 SUV39H1O43463 412 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 NME2P1O60361 137 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 UGT2B11O75310 529 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 PPM1BO75688 479 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 NME2P22392 152 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 GABRA3P34903 492 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 PIGAP37287 484 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 RFC3P40938 356 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 RFX3P48380 749 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 KCNK10P57789 538 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 PAGE3Q5JUK9 113 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 EXOSC6Q5RKV6 272 aaKnown RBP11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 METTL21CQ5VZV1 264 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 RTL4Q6ZR62 310 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 ZNF621Q6ZSS3 439 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 C6orf120Q7Z4R8 191 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 CPLX4Q7Z7G2 160 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 SULF2Q8IWU5 870 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 GPALPP1Q8IXQ4 340 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 CISD2Q8N5K1 135 aaKnown RBP11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 CPSF7Q8N684 471 aaKnown RBP11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 HORMAD2Q8N7B1 307 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 CDRT4Q8N9R6 151 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 GOT1L1Q8NHS2 421 aaPredicted RBP11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 PNPT1Q8TCS8 783 aaKnown RBP11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 GPR151Q8TDV0 419 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 CDS1Q92903 461 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 HGDQ93099 445 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 TMEM125Q96AQ2 219 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 RMND5BQ96G75 393 aaPredicted RBP11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 AURKBQ96GD4 344 aaPredicted RBP11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 SLC35G5Q96KT7 338 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 ADOQ96SZ5 270 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 SLC35A5Q9BS91 424 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 NMUR2Q9GZQ4 415 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 SAR1AQ9NR31 198 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 FLRT3Q9NZU0 649 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 SLAMF8Q9P0V8 285 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 ARMCX1Q9P291 453 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 CBLCQ9ULV8 474 aa11.66□□□□□ -0.54
AC004540.1-205ENST00000420774 ZNF462Q96JM2 2506 aa11.65□□□□□ -0.54
AC004540.1-205ENST00000420774 RFXANKO14593 260 aa11.65□□□□□ -0.54
AC004540.1-205ENST00000420774 SNX3O60493 162 aa11.65□□□□□ -0.54
AC004540.1-205ENST00000420774 TSPAN2O60636 221 aa11.65□□□□□ -0.54
AC004540.1-205ENST00000420774 REM1O75628 298 aa11.65□□□□□ -0.54
AC004540.1-205ENST00000420774 NKX2-2O95096 273 aa11.65□□□□□ -0.54
AC004540.1-205ENST00000420774 IGKV1D-16P01601 117 aa11.65□□□□□ -0.54
AC004540.1-205ENST00000420774 UQCRC2P22695 453 aa11.65□□□□□ -0.54
AC004540.1-205ENST00000420774 PTPN6P29350 595 aa11.65□□□□□ -0.54
AC004540.1-205ENST00000420774 DNASE1L1P49184 302 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms