RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 SEC24DO94855 1032 aaPredicted RBP19.54■□□□□ 0.72
GPC1-202ENST00000420138 IFNW1P05000 195 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 GSTT1P30711 240 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 PEX19P40855 299 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 LIMS1P48059 325 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 DAB2P98082 770 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 ARHGAP11BQ3KRB8 267 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 ATAD3BQ5T9A4 648 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 TCTN3Q6NUS6 607 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 ZCCHC12Q6PEW1 402 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 FRRS1Q6ZNA5 592 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 RBM45Q8IUH3 476 aaKnown RBP19.54■□□□□ 0.72
GPC1-202ENST00000420138 GALNT12Q8IXK2 581 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 OFCC1Q8IZS5 231 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 CDRT4Q8N9R6 151 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 PIP5K1AQ99755 562 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 NDC1Q9BTX1 674 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 YTHDF1Q9BYJ9 559 aaKnown RBP19.54■□□□□ 0.72
GPC1-202ENST00000420138 PDP1Q9P0J1 537 aaPredicted RBP19.54■□□□□ 0.72
GPC1-202ENST00000420138 KCND3Q9UK17 655 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 A0A087WXM4 84 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 TRIM64A6NGJ6 449 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 ADAMDEC1O15204 470 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 BMP10O95393 424 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 AGR2O95994 175 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 ZNF883P0CG24 379 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 STT3AP46977 705 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 EFNA3P52797 238 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 MAPK10P53779 464 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 MLIPQ5VWP3 458 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 KDM4DQ6B0I6 523 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 BORAQ6PGQ7 559 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 PRR23CQ6ZRP0 262 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 C16orf62Q7Z3J2 963 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 CHDHQ8NE62 594 aaPredicted RBP19.53■□□□□ 0.72
GPC1-202ENST00000420138 OR52R1Q8NGF1 315 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 PROX1Q92786 737 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 RIT1Q92963 219 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 DUSP22Q9NRW4 184 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 ACER3Q9NUN7 267 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 NDOR1Q9UHB4 597 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 CHST2Q9Y4C5 530 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 DSCR3O14972 297 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 HS6ST1O60243 411 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 RHCEP18577 417 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 ALDH3B2P48448 385 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 ARHGDIAP52565 204 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 HMGA2P52926 109 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 DSG2Q14126 1118 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 FAHD1Q6P587 224 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 RBM18Q96H35 190 aaKnown RBP19.53■□□□□ 0.72
GPC1-202ENST00000420138 SDF2Q99470 211 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 SPATA5L1Q9BVQ7 753 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 CALML5Q9NZT1 146 aa19.53■□□□□ 0.72
GPC1-202ENST00000420138 SCN2AQ99250 2005 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 TRIM64CA6NLI5 447 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 TNFRSF11BO00300 401 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 MITFO75030 526 aaPredicted RBP19.52■□□□□ 0.72
GPC1-202ENST00000420138 LGI1O95970 557 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 PIGAP37287 484 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 EMDP50402 254 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 YOD1Q5VVQ6 348 aaPredicted RBP19.52■□□□□ 0.72
GPC1-202ENST00000420138 TTC23Q5W5X9 447 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 TYW3Q6IPR3 259 aaKnown RBP19.52■□□□□ 0.72
GPC1-202ENST00000420138 SUMF1Q8NBK3 374 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 CCDC74BQ96LY2 380 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 OR1F2PQ96R84 312 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 STACQ99469 402 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 RBM38Q9H0Z9 239 aaKnown RBP19.52■□□□□ 0.72
GPC1-202ENST00000420138 FAM118AQ9NWS6 357 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 COMMD3-BMI1R4GMX3 469 aa19.52■□□□□ 0.72
GPC1-202ENST00000420138 A0A1B0GX78 115 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 ALOX5P09917 674 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 POLR2IP36954 125 aaKnown RBP19.51■□□□□ 0.71
GPC1-202ENST00000420138 GRK6P43250 576 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 CDH12P55289 794 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 CDH15P55291 814 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 SPIBQ01892 262 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 KCNAB2Q13303 367 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 CCNJQ5T5M9 372 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 DBX2Q6ZNG2 339 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 VRK2Q86Y07 508 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 PIK3R3Q92569 461 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 DGAT2Q96PD7 388 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 PINK1Q9BXM7 581 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 ZNF350Q9GZX5 532 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 ZNF304Q9HCX3 659 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 ACAD8Q9UKU7 415 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 MKLN1Q9UL63 735 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 CDC14AQ9UNH5 594 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 SATB2Q9UPW6 733 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 PCDHGB2Q9Y5G2 931 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 IGKV3D-11A0A0A0MRZ8 115 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 M0R3H8 397 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 NKX2-2O95096 273 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 ZNF806P0C7X5 589 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 ATXN8OSP0DMR3 200 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 SSTR4P31391 388 aa19.51■□□□□ 0.71
GPC1-202ENST00000420138 DUSP3P51452 185 aaPredicted RBP19.51■□□□□ 0.71
GPC1-202ENST00000420138 GANABQ14697 944 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms