RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 TNIP2Q8NFZ5 429 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 OR4N2Q8NGD1 307 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 OR1J4Q8NGS1 313 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 RDH11Q8TC12 318 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 UBLCP1Q8WVY7 318 aaPredicted RBP10.06□□□□□ -0.8
SSBP3-206ENST00000420121 WDYHV1Q96HA8 205 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 METTL7AQ9H8H3 244 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 FOLH1BQ9HBA9 442 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 MYNNQ9NPC7 610 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 TAS2R7Q9NYW3 318 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 GRID1Q9ULK0 1009 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 L3MBTL1Q9Y468 752 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 POLR3HQ9Y535 204 aaPredicted RBP10.06□□□□□ -0.8
SSBP3-206ENST00000420121 PTGDR2Q9Y5Y4 395 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 AKAP6Q13023 2319 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 MED13LQ71F56 2210 aa10.06□□□□□ -0.8
SSBP3-206ENST00000420121 PRAMEF25A6NGN4 478 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 SMIM23A6NLE4 172 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 AHRRA9YTQ3 701 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 CDH16O75309 829 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 ERN1O75460 977 aaKnown RBP10.05□□□□□ -0.8
SSBP3-206ENST00000420121 BCAS2O75934 225 aaPredicted RBP10.05□□□□□ -0.8
SSBP3-206ENST00000420121 RSL1D1O76021 490 aaKnown RBP10.05□□□□□ -0.8
SSBP3-206ENST00000420121 CPA3P15088 417 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 KRT15P19012 456 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 KRT4P19013 534 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 PRPH2P23942 346 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 TACR1P25103 407 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 TIMP3P35625 211 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 ZNF136P52737 540 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 NAA20P61599 178 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 PSG6Q00889 435 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 C2orf80Q0P641 193 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 TESK1Q15569 626 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 SLC25A35Q3KQZ1 300 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 SPDYAQ5MJ70 313 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 CLEC6AQ6EIG7 209 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 Q6ZSR9 355 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 YRDCQ86U90 279 aaKnown RBP10.05□□□□□ -0.8
SSBP3-206ENST00000420121 SAMD14Q8IZD0 417 aaPredicted RBP10.05□□□□□ -0.8
SSBP3-206ENST00000420121 FAM9CQ8IZT9 166 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 C4orf33Q8N1A6 199 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 OR2T11Q8NH01 316 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 OR2W6PQ8NHA6 318 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 EGLN2Q96KS0 407 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 FCRL1Q96LA6 429 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 COL21A1Q96P44 957 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 SH3GL2Q99962 352 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 G6PC3Q9BUM1 346 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 GATA5Q9BWX5 397 aaPredicted RBP10.05□□□□□ -0.8
SSBP3-206ENST00000420121 SHCBP1LQ9BZQ2 653 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 OR2B2Q9GZK3 357 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 TUBB1Q9H4B7 451 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 PPCSQ9HAB8 311 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 SERHLQ9NQF3 203 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 PFDN4Q9NQP4 134 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 MAPRE3Q9UPY8 281 aa10.05□□□□□ -0.8
SSBP3-206ENST00000420121 A0A087WV62 115 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 CCDC151A5D8V7 595 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 MBD3L4A6NDZ8 208 aaPredicted RBP10.04□□□□□ -0.8
SSBP3-206ENST00000420121 MBD3L3A6NE82 208 aaPredicted RBP10.04□□□□□ -0.8
SSBP3-206ENST00000420121 MBD3L5A6NJ08 208 aaPredicted RBP10.04□□□□□ -0.8
SSBP3-206ENST00000420121 H3BQF6 201 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 UPK1AO00322 258 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 PLOD2O00469 737 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 COPEO14579 308 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 REM1O75628 298 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 JUNP05412 331 aaKnown RBP10.04□□□□□ -0.8
SSBP3-206ENST00000420121 UROSP10746 265 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 CAPN3P20807 821 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 MPIP34949 423 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 MC3RP41968 323 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 CCT5P48643 541 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 PNLIPRP2P54317 469 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 GFRA1P56159 465 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 SNTB1Q13884 538 aaKnown RBP10.04□□□□□ -0.8
SSBP3-206ENST00000420121 LIPMQ5VYY2 423 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 NSUN5P2Q63ZY6 315 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 NOXRED1Q6NXP6 359 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 RNF165Q6ZSG1 346 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 WDR53Q7Z5U6 358 aaPredicted RBP10.04□□□□□ -0.8
SSBP3-206ENST00000420121 ADGRE4PQ86SQ3 457 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 LACC1Q8IV20 430 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 C10orf107Q8IVU9 208 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 MBD3L2Q8NHZ7 208 aaPredicted RBP10.04□□□□□ -0.8
SSBP3-206ENST00000420121 CDC26Q8NHZ8 85 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 FAM76AQ8TAV0 307 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 ABTB1Q969K4 478 aaPredicted RBP10.04□□□□□ -0.8
SSBP3-206ENST00000420121 AMDHD1Q96NU7 426 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 ADOQ96SZ5 270 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 GLIPR2Q9H4G4 154 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 MKS1Q9NXB0 559 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 KLRF1Q9NZS2 232 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 KCNN3Q9UGI6 736 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 FBXL2Q9UKC9 423 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 C19orf53Q9UNZ5 99 aaPredicted RBP10.04□□□□□ -0.8
SSBP3-206ENST00000420121 CAMK2AQ9UQM7 478 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 WIF1Q9Y5W5 379 aa10.04□□□□□ -0.8
SSBP3-206ENST00000420121 NUP214P35658 2090 aaPredicted RBP10.03□□□□□ -0.8
SSBP3-206ENST00000420121 MAP1AP78559 2803 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms