RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 NME2P1O60361 137 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 LYPD3O95274 346 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 ABHD2P08910 425 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 CD86P42081 329 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 XCR1P46094 333 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 RGRP47804 291 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 HNRNPFP52597 415 aaKnown RBP3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 RPA4Q13156 261 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 RFTN1Q14699 578 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 SHROOM1Q2M3G4 852 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 PNCKQ6P2M8 343 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 DPY19L2P2Q6ZN68 376 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 TOM1L2Q6ZVM7 507 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 YRDCQ86U90 279 aaKnown RBP3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 PRR22Q8IZ63 422 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 MSANTD4Q8NCY6 345 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 ZNF397Q8NF99 534 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 LINC01006Q8NI28 216 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 CCDC26Q8TAB7 109 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 SIRPDQ9H106 197 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 MID1IP1Q9NPA3 183 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 PRMT8Q9NR22 394 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 CA5BQ9Y2D0 317 aa3.04□□□□□ -1.92
HMGB1P49-201ENST00000418882 ADAM12O43184 909 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 HTATSF1O43719 755 aaKnown RBP3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 LCMT2O60294 686 aaKnown RBP3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 TOXO94900 526 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 IGSF6O95976 241 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 MT-ND3P03897 115 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 APRTP07741 180 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 PRG2P13727 222 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 CD1EP15812 388 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 IGHV1-2P23083 117 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 KRTAP5-9P26371 169 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 PRKAR2BP31323 418 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 RFC2P35250 354 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 STX17P56962 302 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 YBEYP58557 167 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 KRTAP10-8P60410 259 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 SRP54P61011 504 aaKnown RBP3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 GFPT1Q06210 699 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 AP1B1Q10567 949 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 SERTAD2Q14140 314 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 SBK1Q52WX2 424 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 C2orf83Q53S99 150 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 C1orf186Q6ZWK4 172 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 TMEM185AQ8NFB2 350 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 TBC1D31Q96DN5 1066 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 HPS4Q9NQG7 708 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 CLIP2Q9UDT6 1046 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 KLHL21Q9UJP4 597 aa3.03□□□□□ -1.92
HMGB1P49-201ENST00000418882 IGLV8-61A0A075B6I0 122 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 LRIT2A6NDA9 550 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 C11orf98E9PRG8 122 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 STK17BO94768 372 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 SLC4A1P02730 911 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 PTBP1P26599 531 aaKnown RBP eCLIP3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 GPC3P51654 580 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 CASP9P55211 416 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 CD47Q08722 323 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 IL18R1Q13478 541 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 DCAF4L1Q3SXM0 396 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 UFSP1Q6NVU6 142 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 TSEN54Q7Z6J9 526 aaKnown RBP3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 ADAMTSL2Q86TH1 951 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 APOBEC3FQ8IUX4 373 aaKnown RBP3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 MLKLQ8NB16 471 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 CCDC51Q96ER9 411 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 LINC00167Q96N53 147 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 TECTBQ96PL2 329 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 KIR2DL4Q99706 377 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 CBWD1Q9BRT8 395 aa3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 OPN3Q9H1Y3 402 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 ISG20L2Q9H9L3 353 aaKnown RBP3.02□□□□□ -1.93
HMGB1P49-201ENST00000418882 METP08581 1390 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 B4DXG7 233 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 PANO1I0J062 215 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 NOL4O94818 638 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 BAG2O95816 211 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 OLFM2O95897 454 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 HSPB1P04792 205 aaKnown RBP3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 GHRP10912 638 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 ZNF18P17022 549 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 ACVR1BP36896 505 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 EFNA3P52797 238 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 PPP1R8Q12972 351 aaKnown RBP3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 TSTA3Q13630 321 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 GLYR1Q49A26 553 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 AGKQ53H12 422 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 ZNF57Q68EA5 555 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 CWC27Q6UX04 472 aaKnown RBP3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 HACD2Q6Y1H2 254 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 RANBP3LQ86VV4 465 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 PEX5LQ8IYB4 626 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 COLGALT1Q8NBJ5 622 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 OR52E1Q8NGJ3 308 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 ADAMTS16Q8TE57 1224 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 FRAT1Q92837 279 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 DPH7Q9BTV6 452 aa3.01□□□□□ -1.93
HMGB1P49-201ENST00000418882 ELOVL4Q9GZR5 314 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms