RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 WDR53Q7Z5U6 358 aaPredicted RBP11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 UBASH3BQ8TF42 649 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ASB15Q8WXK1 588 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CNRIP1Q96F85 164 aaPredicted RBP11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 OR2A14Q96R47 310 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 OR7D2Q96RA2 312 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CTRCQ99895 268 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 COLEC10Q9Y6Z7 277 aa11□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 AKAP8O43823 692 aaKnown RBP10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SSX4O60224 188 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 UBXN7O94888 489 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 S100A1P23297 94 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MAT2AP31153 395 aaKnown RBP10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 LIMK1P53667 647 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 LSM11P83369 360 aaKnown RBP eCLIP10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CDK5Q00535 292 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SLC30A6Q6NXT4 461 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 XKRXQ6PP77 449 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 VRK2Q86Y07 508 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 UBE2J2Q8N2K1 259 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ZNF513Q8N8E2 541 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ZFP41Q8N8Y5 198 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 LCN9Q8WX39 176 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 FBXL12Q9NXK8 326 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 THAP10Q9P2Z0 257 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 STON1Q9Y6Q2 735 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TRPM6Q9BX84 2022 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 LAMA3Q16787 3333 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 GSAPA4D1B5 854 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SYNDIG1LA6NDD5 238 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 AGRPO00253 132 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 APODP05090 189 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 AHRP35869 848 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 DSG2Q14126 1118 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CCDC85BQ15834 202 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MINDY4Q4G0A6 757 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PEX5LQ8IYB4 626 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 GDPD1Q8N9F7 314 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 OR52P1PQ8NH57 321 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TRMT61AQ96FX7 289 aaKnown RBP10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 DEPDC7Q96QD5 511 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MCHR1Q99705 422 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TIMM29Q9BSF4 260 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TEX101Q9BY14 249 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PLA2G12AQ9BZM1 189 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 HOXD1Q9GZZ0 328 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 NPAP1Q9NZP6 1156 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TMEM129A0AVI4 362 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SYT5O00445 386 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ADH1BP00325 375 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 HLA-DPB1P04440 258 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CLEC2LP0C7M8 214 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 CELP19835 753 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 HOXC5Q00444 222 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 RUNX3Q13761 415 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MLF2Q15773 248 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 BAK1Q16611 211 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SLC48A1Q6P1K1 146 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PLET1Q6UQ28 207 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 RD3Q7Z3Z2 195 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 GALNT6Q8NCL4 622 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MORN4Q8NDC4 146 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 OR2L3Q8NG85 312 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 BADQ92934 168 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TMED9Q9BVK6 235 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 BTBD1Q9H0C5 482 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 KIAA1671Q9BY89 1806 aa10.99□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 PKLRP30613 574 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TLX1P31314 330 aaPredicted RBP10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 HTR3AP46098 478 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SLC16A1P53985 500 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 RPS25P62851 125 aaKnown RBP10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 RPS21P63220 83 aaKnown RBP10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 QPRTQ15274 297 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 FAM214AQ32MH5 1076 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 NRROSQ86YC3 692 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SLC7A5P1Q8MH63 180 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 KLHL36Q8N4N3 616 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 OR4E2Q8NGC2 313 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 DMRTB1Q96MA1 342 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 WDFY2Q96P53 400 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 NEDD4LQ96PU5 975 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 GPA33Q99795 319 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ACTRT3Q9BYD9 372 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 MAN2C1Q9NTJ4 1040 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 ADAM30Q9UKF2 790 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 YARS2Q9Y2Z4 477 aaKnown RBP10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TBC1D3DA0A087WVF3 549 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TBC1D3IA0A087WXS9 549 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TBC1D3EA0A087X179 549 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TBC1D3KA0A087X1G2 549 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TBC1D3FA6NER0 549 aaPredicted RBP10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TBC1D3LB9A6J9 549 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 H3BQ06 376 aaPredicted RBP10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 HMGN1P05114 100 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 SLC35G6P0C7Q6 338 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 TBC1D3HP0C7X1 549 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 GNSP15586 552 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 C5AR1P21730 350 aa10.98□□□□□ -0.65
CSPG4P3Y-201ENST00000418188 GJA4P35212 333 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms