RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 NEIL3Q8TAT5 605 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 THAP6Q8TBB0 222 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 HASPINQ8TF76 798 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 NELL1Q92832 810 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 ORAI1Q96D31 301 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 HHIPQ96QV1 700 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 ALX4Q9H161 411 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 FZD8Q9H461 694 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 BARX1Q9HBU1 254 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 ATP13A1Q9HD20 1204 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 ISYNA1Q9NPH2 558 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 BTG4Q9NY30 223 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 AKAP7Q9P0M2 348 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 NTMQ9P121 344 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 DHCR7Q9UBM7 475 aaKnown RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 OR12D3Q9UGF7 316 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 TRPS1Q9UHF7 1281 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 ACSL6Q9UKU0 697 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 MED16Q9Y2X0 877 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 PLEKHM1Q9Y4G2 1056 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 KCTD3Q9Y597 815 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 NRXN2Q9P2S2 1712 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 STRCQ7RTU9 1775 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 TMEM218A2RU14 115 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 KLRG2A4D1S0 409 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 HMSDA8MTL9 139 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 C19orf81C9J6K1 198 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 PHYHO14832 338 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 MID1O15344 667 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SCN2BO60939 215 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 ADAMTS4O75173 837 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 STX11O75558 287 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 GASTP01350 101 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 EIF4EP06730 217 aaKnown RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 THP07101 528 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 RD3LP0DJH9 198 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 GAAP10253 952 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 FOLR2P14207 255 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 ACPPP15309 386 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 TNFRSF1BP20333 461 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 NPR2P20594 1047 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 AKAP5P24588 427 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 AQP1P29972 269 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 CCR1P32246 355 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 CHI3L1P36222 383 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 FEN1P39748 380 aaKnown RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 DGKEP52429 567 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 STC1P52823 247 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SPCS3P61009 180 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SELENOWP63302 87 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 RNF4P78317 190 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 LRRC74AQ0VAA2 488 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 CHAF1BQ13112 559 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 ALKBH1Q13686 389 aaKnown RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 PCBP2Q15366 365 aaKnown RBP eCLIP6.03□□□□□ -1.443e-6■■■■□ 21.7
CCNT1-202ENST00000417344 SSX2Q16385 188 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 GUCA2BQ16661 112 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SLC10A6Q3KNW5 377 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 TMEM255AQ5JRV8 349 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 OR2G6Q5TZ20 316 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 PRAMEF18Q5VWM3 479 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 OR5M10Q6IEU7 315 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 C3orf33Q6P1S2 294 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 HFE2Q6ZVN8 426 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 BCDIN3DQ7Z5W3 292 aaKnown RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SLC9B2Q86UD5 537 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 MARCH9Q86YJ5 346 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 ARMC10Q8N2F6 343 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SLC44A3Q8N4M1 653 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 RELL2Q8NC24 303 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 GOT1L1Q8NHS2 421 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 GATAD2BQ8WXI9 593 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 PMM1Q92871 262 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 TADA1Q96BN2 335 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 CHFRQ96EP1 664 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 MS4A4EQ96PG1 132 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 PANX1Q96RD7 426 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 ABHD1Q96SE0 405 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 GPR21Q99679 349 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 MDFIQ99750 246 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 MAP3K3Q99759 626 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 C7orf50Q9BRJ6 194 aaKnown RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 ADAT1Q9BUB4 502 aaKnown RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 MROH8Q9H579 483 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 MINDY3Q9H8M7 445 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 IPPKQ9H8X2 491 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 CA10Q9NS85 328 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 TEX10Q9NXF1 929 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 TREM2Q9NZC2 230 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 NFKBIL1Q9UBC1 381 aaPredicted RBP6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SLC45A1Q9Y2W3 748 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 AP1M2Q9Y6Q5 423 aa6.03□□□□□ -1.44
CCNT1-202ENST00000417344 SSC5DA1L4H1 1573 aa6.02□□□□□ -1.44
CCNT1-202ENST00000417344 SCN9AQ15858 1988 aa6.02□□□□□ -1.45
CCNT1-202ENST00000417344 ELOA3CA0A087WX78 387 aaPredicted RBP6.02□□□□□ -1.45
CCNT1-202ENST00000417344 A0A1B0GVC2 190 aa6.02□□□□□ -1.45
CCNT1-202ENST00000417344 TMEM129A0AVI4 362 aa6.02□□□□□ -1.45
CCNT1-202ENST00000417344 OR2M5A3KFT3 312 aa6.02□□□□□ -1.45
CCNT1-202ENST00000417344 C2orf78A6NCI8 922 aa6.02□□□□□ -1.45
CCNT1-202ENST00000417344 A6NIN4 97 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms