RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 ZYG11AQ6WRX3 759 aa14.15□□□□□ -0.14
ACTB-202ENST00000414620 WDSUB1Q8N9V3 476 aa14.15□□□□□ -0.14
ACTB-202ENST00000414620 C9orf106Q8NAJ2 232 aa14.15□□□□□ -0.14
ACTB-202ENST00000414620 OR7G2Q8NG99 324 aa14.15□□□□□ -0.14
ACTB-202ENST00000414620 OR4N2Q8NGD1 307 aa14.15□□□□□ -0.14
ACTB-202ENST00000414620 EFHD2Q96C19 240 aaPredicted RBP14.15□□□□□ -0.14
ACTB-202ENST00000414620 TMCO6Q96DC7 493 aa14.15□□□□□ -0.14
ACTB-202ENST00000414620 BTBD9Q96Q07 612 aa14.15□□□□□ -0.14
ACTB-202ENST00000414620 BBS4Q96RK4 519 aa14.15□□□□□ -0.14
ACTB-202ENST00000414620 SHCBP1LQ9BZQ2 653 aa14.15□□□□□ -0.14
ACTB-202ENST00000414620 C12orf65Q9H3J6 166 aaKnown RBP14.15□□□□□ -0.14
ACTB-202ENST00000414620 SLC24A3Q9HC58 644 aa14.15□□□□□ -0.14
ACTB-202ENST00000414620 DCDC2Q9UHG0 476 aa14.15□□□□□ -0.14
ACTB-202ENST00000414620 FBXL2Q9UKC9 423 aa14.15□□□□□ -0.14
ACTB-202ENST00000414620 EXO1Q9UQ84 846 aaKnown RBP14.15□□□□□ -0.14
ACTB-202ENST00000414620 TEP1Q99973 2627 aaKnown RBP14.15□□□□□ -0.14
ACTB-202ENST00000414620 CCDC168Q8NDH2 2452 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 CCDC151A5D8V7 595 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 EEF1E1-BLOC1S5C9J1V9 151 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 H0Y3Z8 333 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 EEF1E1O43324 174 aaKnown RBP14.14□□□□□ -0.15
ACTB-202ENST00000414620 TSPAN2O60636 221 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 CRCPO75575 148 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 BCAS2O75934 225 aaPredicted RBP14.14□□□□□ -0.15
ACTB-202ENST00000414620 JUNP05412 331 aaKnown RBP14.14□□□□□ -0.15
ACTB-202ENST00000414620 TACR1P25103 407 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 DNAJA1P31689 397 aaKnown RBP14.14□□□□□ -0.15
ACTB-202ENST00000414620 GCKP35557 465 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 KRT20P35900 424 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 ART1P52961 327 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 ZNF763Q0D2J5 394 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 SNTA1Q13424 505 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 RCAN2Q14206 197 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 LARP4Q71RC2 724 aaKnown RBP eCLIP14.14□□□□□ -0.15
ACTB-202ENST00000414620 SLC44A2Q8IWA5 706 aaPredicted RBP14.14□□□□□ -0.15
ACTB-202ENST00000414620 CCDC63Q8NA47 563 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 UBLCP1Q8WVY7 318 aaPredicted RBP14.14□□□□□ -0.15
ACTB-202ENST00000414620 RNASE6Q93091 150 aaKnown RBP14.14□□□□□ -0.15
ACTB-202ENST00000414620 SLC35A4Q96G79 324 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 VSTM2LQ96N03 204 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 TUBA1CQ9BQE3 449 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 POLDIP3Q9BY77 421 aaKnown RBP14.14□□□□□ -0.15
ACTB-202ENST00000414620 OR2B2Q9GZK3 357 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 TNFRSF12AQ9NP84 129 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 FETUBQ9UGM5 382 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 DKKL1Q9UK85 242 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 WIF1Q9Y5W5 379 aa14.14□□□□□ -0.15
ACTB-202ENST00000414620 MBD3L4A6NDZ8 208 aaPredicted RBP14.13□□□□□ -0.15
ACTB-202ENST00000414620 MBD3L3A6NE82 208 aaPredicted RBP14.13□□□□□ -0.15
ACTB-202ENST00000414620 MBD3L5A6NJ08 208 aaPredicted RBP14.13□□□□□ -0.15
ACTB-202ENST00000414620 CD8B2A6NJW9 211 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 SCO2O43819 266 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 CTAG2O75638 210 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 CBR3O75828 277 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 ACTL6AO96019 429 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 PROCP04070 461 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 CYP4B1P13584 511 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 MC3RP41968 323 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 STARP49675 285 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 NCBP2P52298 156 aaKnown RBP eCLIP14.13□□□□□ -0.155e-18■■□□□ 11.9
ACTB-202ENST00000414620 DGKQP52824 942 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 SF3B4Q15427 424 aaKnown RBP eCLIP14.13□□□□□ -0.152e-17■■■■□ 24.5
ACTB-202ENST00000414620 CEBPEQ15744 281 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 TMEM107Q6UX40 140 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 IFNEQ86WN2 208 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 PLCZ1Q86YW0 608 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 TRIM42Q8IWZ5 723 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 SAMD14Q8IZD0 417 aaPredicted RBP14.13□□□□□ -0.15
ACTB-202ENST00000414620 MBD3L2Q8NHZ7 208 aaPredicted RBP14.13□□□□□ -0.15
ACTB-202ENST00000414620 C11orf24Q96F05 449 aaPredicted RBP14.13□□□□□ -0.15
ACTB-202ENST00000414620 LRRC46Q96FV0 321 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 LIME1Q9H400 295 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 MIEF1Q9NQG6 463 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 ZNF629Q9UEG4 869 aaPredicted RBP14.13□□□□□ -0.15
ACTB-202ENST00000414620 RPH3AQ9Y2J0 694 aaPredicted RBP14.13□□□□□ -0.15
ACTB-202ENST00000414620 OR10H1Q9Y4A9 318 aa14.13□□□□□ -0.15
ACTB-202ENST00000414620 B4DXG7 233 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 SYT5O00445 386 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 TMIGD3P0DMS9 266 aaPredicted RBP14.12□□□□□ -0.15
ACTB-202ENST00000414620 DDCP20711 480 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 GRK2P25098 689 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 CTSSP25774 331 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 MPIP34949 423 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 IST1P53990 364 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 FOXF2Q12947 444 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 EFR3AQ14156 821 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 FLYWCH1Q4VC44 716 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 CFAP157Q5JU67 520 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 GALNT18Q6P9A2 607 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 ENPP6Q6UWR7 440 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 FRMD7Q6ZUT3 714 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 EPS8L3Q8TE67 593 aaKnown RBP14.12□□□□□ -0.15
ACTB-202ENST00000414620 ERP27Q96DN0 273 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 CCDC126Q96EE4 140 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 SFXN2Q96NB2 322 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 CLEC4MQ9H2X3 399 aaPredicted RBP14.12□□□□□ -0.15
ACTB-202ENST00000414620 TAS2R10Q9NYW0 307 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 TAS2R9Q9NYW1 312 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 FLRT3Q9NZU0 649 aa14.12□□□□□ -0.15
ACTB-202ENST00000414620 FIS1Q9Y3D6 152 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms