RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.58□□□□□ -0.56
CHMP3-204ENST00000409727 TCRBV16S1A1N1A0A5B0 115 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 HNRNPCL2B2RXH8 293 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 HNRNPCL3B7ZW38 293 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 PRAMEF2O60811 474 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 E2F6O75461 281 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 AGR2O95994 175 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 FESP07332 822 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 HNRNPCL4P0DMR1 293 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 CD247P20963 164 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 MAGEA2P43356 314 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 RNF144AP50876 292 aaPredicted RBP11.58□□□□□ -0.56
CHMP3-204ENST00000409727 TXNL4AP83876 142 aaKnown RBP11.58□□□□□ -0.56
CHMP3-204ENST00000409727 ZNHIT3Q15649 155 aaPredicted RBP11.58□□□□□ -0.56
CHMP3-204ENST00000409727 GPR68Q15743 365 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 DCST2Q5T1A1 773 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 OTUD3Q5T2D3 398 aaPredicted RBP11.58□□□□□ -0.56
CHMP3-204ENST00000409727 HEPHL1Q6MZM0 1159 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 RAB11FIP2Q7L804 512 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 OVCH1Q7RTY7 1134 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 METTL25Q8N6Q8 603 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 CATSPER1Q8NEC5 780 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 DEFB124Q8NES8 71 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 GPR32P1Q8NGA4 272 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 OR4N2Q8NGD1 307 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 PROX1Q92786 737 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 MR1Q95460 341 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 RMND5BQ96G75 393 aaPredicted RBP11.58□□□□□ -0.56
CHMP3-204ENST00000409727 TRNT1Q96Q11 434 aaKnown RBP11.58□□□□□ -0.56
CHMP3-204ENST00000409727 SLC38A1Q9H2H9 487 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 VCXQ9H320 206 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 FBXO34Q9NWN3 711 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 VNN3Q9NY84 501 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 WDR45Q9Y484 360 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 GPC6Q9Y625 555 aaPredicted RBP11.58□□□□□ -0.56
CHMP3-204ENST00000409727 OTOGLQ3ZCN5 2332 aa11.58□□□□□ -0.56
CHMP3-204ENST00000409727 NPIPA5A0A0B4J1W7 369 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 PRAMEF25A6NGN4 478 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 IDSB3KWA1 339 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 NPIPA7E9PJI5 369 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 DYRK3O43781 588 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 PEX1O43933 1283 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 LRP3O75074 770 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 CNOT3O75175 753 aaKnown RBP11.57□□□□□ -0.56
CHMP3-204ENST00000409727 KLK3P07288 261 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-204ENST00000409727 JMJD7P0C870 316 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 NPIPA8P0DM63 369 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 NBL1P41271 181 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 PSG6Q00889 435 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 FUT7Q11130 342 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 BIKQ13323 160 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ILKQ13418 452 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ELOAQ14241 798 aaKnown RBP11.57□□□□□ -0.56
CHMP3-204ENST00000409727 LAPTM4AQ15012 233 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ELAVL1Q15717 326 aaKnown RBP11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ARHGAP11BQ3KRB8 267 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 DCAF12Q5T6F0 453 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ZCCHC12Q6PEW1 402 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 MED25Q71SY5 747 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 COMTD1Q86VU5 262 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 VRK2Q86Y07 508 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 HS3ST5Q8IZT8 346 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 GALNT6Q8NCL4 622 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 SLC2A12Q8TD20 617 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 GEMIN6Q8WXD5 167 aaKnown RBP11.57□□□□□ -0.56
CHMP3-204ENST00000409727 C7orf34Q96L11 122 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 SDF2Q99470 211 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ITPAQ9BY32 194 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 TGIF2Q9GZN2 237 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 BCL2L10Q9HD36 194 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 DUSP22Q9NRW4 184 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 CALML5Q9NZT1 146 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ZNF451Q9Y4E5 1061 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 PCDHGB3Q9Y5G1 929 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 WDFY3Q8IZQ1 3526 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 IGLV3-12A0A075B6K2 115 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 B4E171 279 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 J3KTA2 159 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 MT-CO3P00414 261 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 CLPSP04118 112 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ALPPP05187 535 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 IFI6P09912 130 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ETS2P15036 469 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ZNF26P17031 533 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-204ENST00000409727 TSPAN7P41732 249 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 POU6F2P78424 691 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-204ENST00000409727 PUM1Q14671 1186 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ZNF311Q5JNZ3 666 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 HES3Q5TGS1 186 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 OR2T5Q6IEZ7 315 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 TYW3Q6IPR3 259 aaKnown RBP11.57□□□□□ -0.56
CHMP3-204ENST00000409727 TBPL2Q6SJ96 375 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 FRRS1Q6ZNA5 592 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 TMEM179BQ7Z7N9 219 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ZNF615Q8N8J6 731 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 OR2T29Q8NH02 315 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 MAGEE2Q8TD90 523 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-204ENST00000409727 VSTM2LQ96N03 204 aa11.57□□□□□ -0.56
CHMP3-204ENST00000409727 ZNF578Q96N58 590 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-204ENST00000409727 STACQ99469 402 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms