RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 PIGUQ9H490 435 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 PLCXD1Q9NUJ7 323 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 MKLN1Q9UL63 735 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 ZNF232Q9UNY5 417 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 IFT52Q9Y366 437 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 WDR45Q9Y484 360 aa23.06■■□□□ 1.28
DNMT3A-206ENST00000406659 A0A0A6YYC8 382 aaPredicted RBP23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 I3L1I5 382 aaPredicted RBP23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 INMTO95050 263 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 MLLT3P42568 568 aaPredicted RBP23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 MAP2K4P45985 399 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 CXCL12P48061 93 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 MAPK10P53779 464 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 TEKQ02763 1124 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 TARDBPQ13148 414 aaKnown RBP eCLIP23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 PRICKLE4Q2TBC4 344 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 TMEM236Q5W0B7 351 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 AHSA2Q719I0 299 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 PRSS48Q7RTY5 328 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 PEX5LQ8IYB4 626 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 ZNF675Q8TD23 568 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 TGM7Q96PF1 710 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 RHNO1Q9BSD3 238 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 REV1Q9UBZ9 1251 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 TMEM131Q92545 1883 aa23.05■■□□□ 1.28
DNMT3A-206ENST00000406659 RHPN2P1A8MT19 583 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 ATE1O95260 518 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 ZIC2O95409 532 aaPredicted RBP23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 C14orf28Q4W4Y0 310 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 NLGN4XQ8N0W4 816 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 POLR2J3Q9H1A7 115 aaKnown RBP23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 CTPS2Q9NRF8 586 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 IRAK4Q9NWZ3 460 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 MAT2BQ9NZL9 334 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 PLCL2Q9UPR0 1127 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 OR10H2O60403 315 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 IFI6P09912 130 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 CCNYL3P0C7X3 344 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 SLC35E2P0CK97 266 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 RNH1P13489 461 aaKnown RBP23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 GP2P55259 537 aaKnown RBP23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 TAS2R41P59536 307 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 ILKQ13418 452 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 NIPAL1Q6NVV3 410 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 ZCCHC12Q6PEW1 402 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 CCDC81Q6ZN84 652 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 CCDC103Q8IW40 242 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 CDRT4Q8N9R6 151 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 SDF2Q99470 211 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 SOHLH2Q9NX45 425 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 PSORS1C1Q9UIG5 152 aa23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 ZNF443Q9Y2A4 671 aaPredicted RBP23.04■■□□□ 1.28
DNMT3A-206ENST00000406659 MPZL2O60487 215 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 IFNA8P32881 189 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 CNR2P34972 360 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 MVKQ03426 396 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 MGAT2Q10469 447 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 EXOSC7Q15024 291 aaKnown RBP23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 LARS2Q15031 903 aaKnown RBP23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 INAVAQ3KP66 663 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 TYW3Q6IPR3 259 aaKnown RBP23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 RAB2BQ8WUD1 216 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 MYDGFQ969H8 173 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 COPS4Q9BT78 406 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 DCUN1D5Q9BTE7 237 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 MAN2C1Q9NTJ4 1040 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 UCKL1Q9NWZ5 548 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 HCN3Q9P1Z3 774 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 GPR55Q9Y2T6 319 aaPredicted RBP23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 ABCA7Q8IZY2 2146 aa23.03■■□□□ 1.28
DNMT3A-206ENST00000406659 CEP192Q8TEP8 1941 aa23.02■■□□□ 1.28
DNMT3A-206ENST00000406659 TLCD2A6NGC4 264 aa23.02■■□□□ 1.28
DNMT3A-206ENST00000406659 FRS3O43559 492 aa23.02■■□□□ 1.28
DNMT3A-206ENST00000406659 FADS2O95864 444 aaKnown RBP23.02■■□□□ 1.28
DNMT3A-206ENST00000406659 GABRB1P18505 474 aa23.02■■□□□ 1.28
DNMT3A-206ENST00000406659 ZP2Q05996 745 aa23.02■■□□□ 1.28
DNMT3A-206ENST00000406659 PTCHD4Q6ZW05 846 aa23.02■■□□□ 1.28
DNMT3A-206ENST00000406659 CLIP4Q8N3C7 705 aa23.02■■□□□ 1.28
DNMT3A-206ENST00000406659 OR4K5Q8NGD3 323 aa23.02■■□□□ 1.28
DNMT3A-206ENST00000406659 DNASE2BQ8WZ79 361 aa23.02■■□□□ 1.28
DNMT3A-206ENST00000406659 DUSP22Q9NRW4 184 aa23.02■■□□□ 1.28
DNMT3A-206ENST00000406659 FOXS1O43638 330 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 PIAS2O75928 621 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 DCNP07585 359 aaKnown RBP23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 CT62P0C5K7 136 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 AVPR1BP47901 424 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 MASP1P48740 699 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 GFERP55789 205 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 EXOSC6Q5RKV6 272 aaKnown RBP23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 COX18Q8N8Q8 333 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 SLC38A4Q969I6 547 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 ZDHHC12Q96GR4 267 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 STACQ99469 402 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 FUNDC2Q9BWH2 189 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 PRR14Q9BWN1 585 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 RBCK1Q9BYM8 510 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 PDE7BQ9NP56 450 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 MRPS33Q9Y291 106 aaKnown RBP23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 CHST2Q9Y4C5 530 aa23.01■■□□□ 1.27
DNMT3A-206ENST00000406659 HYKKA2RU49 373 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms