RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 ZNF888P0CJ79 500 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 CDKN2CP42773 168 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 KIR2DS3Q14952 304 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 C2orf76Q3KRA6 126 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 GXYLT1Q4G148 440 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 BAIAP2L2Q6UXY1 529 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 MAMDC2Q7Z304 686 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 IQCF1Q8N6M8 205 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 CASTOR1Q8WTX7 329 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 MROH6A6NGR9 719 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 PRAMEF26H0Y7S4 382 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 C1SP09871 688 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 MAGEA8P43361 318 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 STT3AP46977 705 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 SLC6A11P48066 632 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 PIN1Q13526 163 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 APOFQ13790 326 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 EIF5AL1Q6IS14 154 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 KCTD9Q7L273 389 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 OR2T4Q8NH00 348 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 RPLP0P6Q8NHW5 317 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 AKAP1Q92667 903 aaKnown RBP eCLIP12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 POLE4Q9NR33 117 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 GABRR3A8MPY1 467 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 VSTM5A8MXK1 200 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 PCDH17O14917 1159 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 TMEM69Q5SWH9 247 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 Q8N402 240 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 PGBD5Q8N414 524 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 ZSCAN4Q8NAM6 433 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 SUN5Q8TC36 379 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 TRUB1Q8WWH5 349 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 ALOXE3Q9BYJ1 711 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 FTSJ1Q9UET6 329 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 GPR52Q9Y2T5 361 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 HERV-K104P61576 105 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 ZNF791Q3KP31 576 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 LRFN4Q6PJG9 635 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 OR6C4Q8NGE1 309 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 VSTM2BA6NLU5 285 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 FAM69BQ5VUD6 431 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 RBM12BQ8IXT5 1001 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 ZNF480Q8WV37 535 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 LPAR4Q99677 370 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 PINK1Q9BXM7 581 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 HDHD5Q9BXW7 423 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 RIMS3Q9UJD0 308 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 PCDHA9Q9Y5H5 950 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 CCDC163A0A0D9SF12 145 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 A0A0J9YY10 115 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 GK3PQ14409 553 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 IRF4Q15306 451 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 LEG1Q6P5S2 330 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 Q6ZSR6 202 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 ZER1Q7Z7L7 766 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 KLHDC9Q8NEP7 349 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 PROKR1Q8TCW9 393 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 LHPPQ9H008 270 aa12.6□□□□□ -0.39
CACNA1C-222ENST00000406454 PHYHO14832 338 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 PRLP01236 227 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 TFPTP0C1Z6 253 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 RIDAP52758 137 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 NFATC3Q12968 1075 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 KEAP1Q14145 624 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 RAET1LQ5VY80 246 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 HMBOX1Q6NT76 420 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 CLEC14AQ86T13 490 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 TMEM151BQ8IW70 566 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 NRG4Q8WWG1 115 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 B4GALT7Q9UBV7 327 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 GTF2F2P13984 249 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 PER3P56645 1201 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 NCS1P62166 190 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 HTRA3P83110 453 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 SERTAD2Q14140 314 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 ACOT4Q8N9L9 421 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 TESCQ96BS2 214 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 CLMPQ9H6B4 373 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 AGPAT4Q9NRZ5 378 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 ALG5Q9Y673 324 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 FOXD2O60548 495 aaPredicted RBP12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 PROX2Q3B8N5 592 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 NKAPLQ5M9Q1 402 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 TMEM151AQ8N4L1 468 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 UBXN10Q96LJ8 280 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 GORASP2Q9H8Y8 452 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 CD207Q9UJ71 328 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 SLC7A7Q9UM01 511 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 HSPB11Q9Y547 144 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 GRK5P34947 590 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 CLDN2P57739 230 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 SAMD8Q96LT4 415 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 ATG5Q9H1Y0 275 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 FMO6PO60774 539 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 HMGN2P05204 90 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 LCN1P31025 176 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 C6orf132Q5T0Z8 1188 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 XKRXQ6PP77 449 aa12.59□□□□□ -0.39
CACNA1C-222ENST00000406454 TCRBV3S1A0A5B6 114 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms