RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 GPR62Q9BZJ7 368 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 FZD3Q9NPG1 666 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 EQTNQ9NQ60 294 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 DOCK3Q8IZD9 2030 aa15.31■□□□□ 0.04
COL4A3BP-204ENST00000405807 ZNF840PA6NDX5 716 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 GFYI3L273 518 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 K7ERQ8 282 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 SEC14L5O43304 696 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 CSO75390 466 aaKnown RBP15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 HSD3B1P14060 373 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 HSD3B2P26439 372 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 SNRPGP62308 76 aaKnown RBP15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 ZNF648Q5T619 568 aaPredicted RBP15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 PLET1Q6UQ28 207 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 SLC24A5Q71RS6 500 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 SLC43A2Q8N370 569 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 LRRC17Q8N6Y2 441 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 ELP5Q8TE02 316 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 IL4I1Q96RQ9 567 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 PRM3Q9NNZ6 103 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 ABCB9Q9NP78 766 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 GPATCH2Q9NW75 528 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 NDUFB11Q9NX14 153 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 MYEF2Q9P2K5 600 aaKnown RBP15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 TBL1XO60907 577 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 GP1BAP07359 652 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 CSF3P09919 207 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 RHCEP18577 417 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 CD22P20273 847 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 MVDP53602 400 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 RSPO2Q6UXX9 243 aaPredicted RBP15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 C1orf52Q8N6N3 182 aaKnown RBP15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 OR52N2Q8NGI0 321 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 C2orf15Q8WU43 125 aaKnown RBP15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 BTN2A2Q8WVV5 523 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 SLC25A46Q96AG3 418 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 QRFPRQ96P65 431 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 POLR2J2Q9GZM3 115 aaKnown RBP15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 BRF2Q9HAW0 419 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 VSX1Q9NZR4 365 aaPredicted RBP15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 CLEC2DQ9UHP7 191 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 KIF25Q9UIL4 384 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 ENPP4Q9Y6X5 453 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 PIKFYVEQ9Y2I7 2098 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 SCN10AQ9Y5Y9 1956 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 ANKDD1BA6NHY2 528 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 TLR4O00206 839 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 LGI1O95970 557 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 RAB25P57735 213 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 ACTR1AP61163 376 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 RAE1P78406 368 aaKnown RBP15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 B4GALNT1Q00973 533 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 SERTAD2Q14140 314 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 RTN4RL1Q86UN2 441 aaPredicted RBP15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 DIRAS2Q96HU8 199 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 TMEM38AQ9H6F2 299 aa15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 NMNAT1Q9HAN9 279 aaPredicted RBP15.3■□□□□ 0.04
COL4A3BP-204ENST00000405807 TCRBV16S1A1N1A0A5B0 115 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 C2orf78A6NCI8 922 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 GPR171O14626 319 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 CDRT1O95170 752 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 RASGRP1O95267 797 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 IL1AP01583 271 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 PDHA2P29803 388 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 SSTR2P30874 369 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 MAPK8P45983 427 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 XKP51811 444 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 CDK6Q00534 326 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 C1DQ13901 141 aaKnown RBP15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 DOC2AQ14183 400 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 GANABQ14697 944 aaKnown RBP15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 CRB2Q5IJ48 1285 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 CLEC2AQ6UVW9 174 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 FBXO22Q8NEZ5 403 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 POC1BQ8TC44 478 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 CREB3L4Q8TEY5 395 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 SNX33Q8WV41 574 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 SLC35A5Q9BS91 424 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 EPHA6Q9UF33 1036 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 RPL36Q9Y3U8 105 aaKnown RBP15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 OR51B4Q9Y5P0 310 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 GNG14A0A1W2PPG7 69 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 A0A1W2PQL4 384 aaPredicted RBP15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 GNG10P50151 68 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 MXD1Q05195 221 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 STX4Q12846 297 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 VEPH1Q14D04 833 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 TRIM40Q6P9F5 258 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 HSDL2Q6YN16 418 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 TSPAN33Q86UF1 283 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 VRK3Q8IV63 474 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 CLDN22Q8N7P3 220 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 NANOGP1Q8N7R0 232 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 PROKR2Q8NFJ6 384 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 PHOSPHO1Q8TCT1 267 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 OVCA2Q8WZ82 227 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 CXorf40BQ96DE9 158 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 MSLNLQ96KJ4 702 aa15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 GFM1Q96RP9 751 aaKnown RBP15.29■□□□□ 0.04
COL4A3BP-204ENST00000405807 SPSB2Q99619 263 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms