RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 CCR6P51684 374 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 RAP2BP61225 183 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 MC2RQ01718 297 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 SEC23BQ15437 767 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 FXNQ16595 210 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 GGTA1PQ4G0N0 100 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 MPPE1Q53F39 396 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 MLIPQ5VWP3 458 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 PRSS42Q7Z5A4 293 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 KCTD20Q7Z5Y7 419 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 UBTD2Q8WUN7 234 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 ST8SIA2Q92186 375 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 PPP1R16AQ96I34 528 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 ZNF582Q96NG8 517 aaPredicted RBP7□□□□□ -1.29
HDAC9-202ENST00000405010 C7orf50Q9BRJ6 194 aaKnown RBP7□□□□□ -1.29
HDAC9-202ENST00000405010 PELOQ9BRX2 385 aaKnown RBP7□□□□□ -1.29
HDAC9-202ENST00000405010 WRAP53Q9BUR4 548 aaKnown RBP7□□□□□ -1.29
HDAC9-202ENST00000405010 SLC7A5P2Q9GIP4 190 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 MFFQ9GZY8 342 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 CDCP1Q9H5V8 836 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 DDX31Q9H8H2 851 aaKnown RBP7□□□□□ -1.29
HDAC9-202ENST00000405010 SLC52A3Q9NQ40 469 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 ACTR10Q9NZ32 417 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 NOP16Q9Y3C1 178 aaKnown RBP7□□□□□ -1.29
HDAC9-202ENST00000405010 RBBP9O75884 186 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 TGM6O95932 706 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 PAK4O96013 591 aaPredicted RBP7□□□□□ -1.29
HDAC9-202ENST00000405010 TPOP07202 933 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 RAB3AP20336 220 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 PTBP1P26599 531 aaKnown RBP eCLIP7□□□□□ -1.29
HDAC9-202ENST00000405010 ACVR2AP27037 513 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 RBMS1P29558 406 aaKnown RBP7□□□□□ -1.29
HDAC9-202ENST00000405010 VIPR1P32241 457 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 PGFP49763 221 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 CCR4P51679 360 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 TAF13Q15543 124 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 DUSP6Q16828 381 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 MINDY4Q4G0A6 757 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 HACD4Q5VWC8 232 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 FAM46CQ5VWP2 391 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 HBMQ6B0K9 141 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 GPR155Q7Z3F1 870 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 RNF180Q86T96 592 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 SIAH3Q8IW03 269 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 L3MBTL4Q8NA19 623 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 PCSK9Q8NBP7 692 aaKnown RBP7□□□□□ -1.29
HDAC9-202ENST00000405010 OR8K3Q8NH51 312 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 METTL2AQ96IZ6 378 aaKnown RBP7□□□□□ -1.29
HDAC9-202ENST00000405010 C7orf34Q96L11 122 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 FERD3LQ96RJ6 166 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 WDR26Q9H7D7 661 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 BRF2Q9HAW0 419 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 MRPL17Q9NRX2 175 aaKnown RBP7□□□□□ -1.29
HDAC9-202ENST00000405010 C5AR2Q9P296 337 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 GNG8Q9UK08 70 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 RCE1Q9Y256 329 aa7□□□□□ -1.29
HDAC9-202ENST00000405010 GLOD5A6NK44 160 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 OR6A2O95222 327 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 IFNA6P05013 189 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 CSN2P05814 226 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 SRCP12931 536 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 HTR2AP28223 471 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 TLX1P31314 330 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-202ENST00000405010 RBM34P42696 430 aaKnown RBP6.99□□□□□ -1.29
HDAC9-202ENST00000405010 XCR1P46094 333 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 TBPL1P62380 186 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 SYT14P1Q58G82 188 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 LAIR1Q6GTX8 287 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 SERPINA13PQ6UXR4 307 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 ZNF280BQ86YH2 543 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 CCDC71Q8IV32 467 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-202ENST00000405010 BOLLQ8N9W6 283 aaKnown RBP6.99□□□□□ -1.29
HDAC9-202ENST00000405010 ZNF527Q8NB42 609 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 BBS10Q8TAM1 723 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 HMGB4Q8WW32 186 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 RGMAQ96B86 450 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 KCTD12Q96CX2 325 aaKnown RBP6.99□□□□□ -1.29
HDAC9-202ENST00000405010 ZNF354BQ96LW1 612 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 TMEM175Q9BSA9 504 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 KLHL9Q9P2J3 617 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 V9GYH0 126 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 MBLAC1A4D2B0 266 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-202ENST00000405010 FAM183AA6NL82 134 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 NFKBIEO00221 500 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 CDK2AP1O14519 115 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 AXIN1O15169 862 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 SOX30O94993 753 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 IGLV3-25P01717 112 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 RLN2P04090 185 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 ELK1P19419 428 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 CSNK2A2P19784 350 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-202ENST00000405010 NFYAP23511 347 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-202ENST00000405010 SHC1P29353 583 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 SRP9P49458 86 aaKnown RBP6.99□□□□□ -1.29
HDAC9-202ENST00000405010 CSRP3P50461 194 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 DLX5P56178 289 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 OR12D2P58182 307 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 ZNF79Q15937 498 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 CLLU1Q5K131 121 aa6.99□□□□□ -1.29
HDAC9-202ENST00000405010 AFMIDQ63HM1 303 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms