RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TIMP4Q99727 224 aa12.16□□□□□ -0.46
SDF4-203ENST00000403997 MECRQ9BV79 373 aa12.16□□□□□ -0.46
SDF4-203ENST00000403997 ENKD1Q9H0I2 346 aa12.16□□□□□ -0.46
SDF4-203ENST00000403997 GALNT9Q9HCQ5 603 aa12.16□□□□□ -0.46
SDF4-203ENST00000403997 SLC17A7Q9P2U7 560 aa12.16□□□□□ -0.46
SDF4-203ENST00000403997 Q9UFV3 132 aa12.16□□□□□ -0.46
SDF4-203ENST00000403997 LGALS13Q9UHV8 139 aa12.16□□□□□ -0.46
SDF4-203ENST00000403997 EXO1Q9UQ84 846 aaKnown RBP12.16□□□□□ -0.46
SDF4-203ENST00000403997 OR10H1Q9Y4A9 318 aa12.16□□□□□ -0.46
SDF4-203ENST00000403997 PCDHGB3Q9Y5G1 929 aa12.16□□□□□ -0.46
SDF4-203ENST00000403997 INTS1Q8N201 2190 aaKnown RBP12.16□□□□□ -0.46
SDF4-203ENST00000403997 FAM47E-STBD1D6RA91 191 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 SNPHO15079 494 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 ABCB7O75027 752 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 COQ9O75208 318 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 SLU7O95391 586 aaKnown RBP12.15□□□□□ -0.46
SDF4-203ENST00000403997 CHRNGP07510 517 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 PRPH2P23942 346 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 TACR1P25103 407 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 PTPN6P29350 595 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 IL12BP29460 328 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 SSTR2P30874 369 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 ADH7P40394 386 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 PTGDSP41222 190 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 MC3RP41968 323 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 CRYZQ08257 329 aaKnown RBP12.15□□□□□ -0.46
SDF4-203ENST00000403997 ZNF155Q12901 538 aaPredicted RBP12.15□□□□□ -0.46
SDF4-203ENST00000403997 EFR3AQ14156 821 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 WIPI1Q5MNZ9 446 aaPredicted RBP12.15□□□□□ -0.46
SDF4-203ENST00000403997 SH2D4BQ5SQS7 431 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 TMEM107Q6UX40 140 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 NPSR1Q6W5P4 371 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 Q6ZSR9 355 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 LARP4Q71RC2 724 aaKnown RBP eCLIP12.15□□□□□ -0.46
SDF4-203ENST00000403997 YRDCQ86U90 279 aaKnown RBP12.15□□□□□ -0.46
SDF4-203ENST00000403997 PM20D2Q8IYS1 436 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 FAM83FQ8NEG4 500 aaPredicted RBP12.15□□□□□ -0.46
SDF4-203ENST00000403997 OR2T11Q8NH01 316 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 TCP10LQ8TDR4 215 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 ABTB1Q969K4 478 aaPredicted RBP12.15□□□□□ -0.46
SDF4-203ENST00000403997 AMDHD1Q96NU7 426 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 TUBB1Q9H4B7 451 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 GLIPR2Q9H4G4 154 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 EML4Q9HC35 981 aaKnown RBP12.15□□□□□ -0.46
SDF4-203ENST00000403997 SERHLQ9NQF3 203 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.15□□□□□ -0.46
SDF4-203ENST00000403997 MAPRE3Q9UPY8 281 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 CAMK2AQ9UQM7 478 aa12.15□□□□□ -0.46
SDF4-203ENST00000403997 V9GYY5 206 aaPredicted RBP12.15□□□□□ -0.46
SDF4-203ENST00000403997 ADGRG4Q8IZF6 3080 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 A0A087WV62 115 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 NPIPB8E9PQR5 432 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 PLOD2O00469 737 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 AKAP10O43572 662 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 NPHS1O60500 1241 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 TSPAN2O60636 221 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 CBR3O75828 277 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 SLITRK5O94991 958 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 FGF4P08620 206 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 NEFHP12036 1026 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 BMP7P18075 431 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 PSPHP78330 225 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 ARL13AQ5H913 290 aaPredicted RBP12.14□□□□□ -0.47
SDF4-203ENST00000403997 RIPPLY2Q5TAB7 128 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 KANK2Q63ZY3 851 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 VASNQ6EMK4 673 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 WDR93Q6P2C0 686 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 LIX1LQ8IVB5 337 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 HOMEZQ8IX15 550 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 DDIASQ8IXT1 998 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 CLYBLQ8N0X4 340 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 OR4N2Q8NGD1 307 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 CAVIN3Q969G5 261 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 EFHD2Q96C19 240 aaPredicted RBP12.14□□□□□ -0.47
SDF4-203ENST00000403997 ELP4Q96EB1 424 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 SLC35A4Q96G79 324 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 TSSK3Q96PN8 268 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 NPDC1Q9NQX5 325 aaPredicted RBP12.14□□□□□ -0.47
SDF4-203ENST00000403997 DDX18Q9NVP1 670 aaKnown RBP12.14□□□□□ -0.47
SDF4-203ENST00000403997 BAIAP2L1Q9UHR4 511 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 C19orf53Q9UNZ5 99 aaPredicted RBP12.14□□□□□ -0.47
SDF4-203ENST00000403997 TRAF6Q9Y4K3 522 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 DNAJC15Q9Y5T4 150 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 ITPR3Q14573 2671 aa12.14□□□□□ -0.47
SDF4-203ENST00000403997 EXPH5Q8NEV8 1989 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 UPK1AO00322 258 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 EPPINO95925 133 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 GCKP35557 465 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 PNLIPRP2P54317 469 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 RPL38P63173 70 aaKnown RBP12.13□□□□□ -0.47
SDF4-203ENST00000403997 MRPS22P82650 360 aaKnown RBP12.13□□□□□ -0.47
SDF4-203ENST00000403997 PSG6Q00889 435 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 TFF3Q07654 80 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 SF3B4Q15427 424 aaKnown RBP eCLIP12.13□□□□□ -0.478e-8■■■■□ 20.5
SDF4-203ENST00000403997 GALNTL6Q49A17 601 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 ACSF3Q4G176 576 aaPredicted RBP12.13□□□□□ -0.47
SDF4-203ENST00000403997 RFTN2Q52LD8 501 aaPredicted RBP12.13□□□□□ -0.47
SDF4-203ENST00000403997 OR5M10Q6IEU7 315 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 ANKRD26P1Q6NSI1 321 aa12.13□□□□□ -0.47
SDF4-203ENST00000403997 RNF165Q6ZSG1 346 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms