RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 LPCAT4Q643R3 524 aa10.44□□□□□ -0.74
CACNA1C-216ENST00000399638 OR4F3Q6IEY1 312 aa10.44□□□□□ -0.74
CACNA1C-216ENST00000399638 HMGN2P46Q86SG4 172 aa10.44□□□□□ -0.74
CACNA1C-216ENST00000399638 KDM1BQ8NB78 822 aa10.44□□□□□ -0.74
CACNA1C-216ENST00000399638 FOXQ1Q9C009 403 aa10.44□□□□□ -0.74
CACNA1C-216ENST00000399638 SDCBP2Q9H190 292 aa10.44□□□□□ -0.74
CACNA1C-216ENST00000399638 SAGE1Q9NXZ1 904 aa10.44□□□□□ -0.74
CACNA1C-216ENST00000399638 SRPK3Q9UPE1 567 aa10.44□□□□□ -0.74
CACNA1C-216ENST00000399638 NKX6-3A6NJ46 265 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 IFNA10P01566 189 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 MYOGP15173 224 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 GABRR1P24046 479 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 HRH2P25021 359 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 CDC34P49427 236 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 NKAIN2Q5VXU1 208 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 MON1BQ7L1V2 547 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 NODALQ96S42 347 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 ZNF696Q9H7X3 374 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 SRA1Q9HD15 236 aaKnown RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 NLE1Q9NVX2 485 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 C17orf105B2RV13 164 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 SULT2B1O00204 365 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 LRRTM2O43300 516 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 H1F0P07305 194 aaKnown RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 GLDCP23378 1020 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 CRHBPP24387 322 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 LSSP48449 732 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 MTPNP58546 118 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 PSMA6P60900 246 aaKnown RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 TLE3Q04726 772 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 PAN3Q58A45 887 aaKnown RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 KCNIP4Q6PIL6 250 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 GFRALQ6UXV0 394 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 TMEM25Q86YD3 366 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 TICAM1Q8IUC6 712 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 LRRC25Q8N386 305 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 PIP5K1AQ99755 562 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 PREBQ9HCU5 417 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 FLRT1Q9NZU1 646 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 PCDHGA1Q9Y5H4 931 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 LRRN3E7EW58 273 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 ZNF780AO75290 641 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 AKR1C2P52895 323 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 NCS1P62166 190 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 SLITRK4Q8IW52 837 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 SLC39A7Q92504 469 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 GATA6Q92908 595 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 TXN2Q99757 166 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 TMEM246Q9BRR3 403 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 CALHM2Q9HA72 323 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 ATP13A2Q9NQ11 1180 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 DUSP13Q9UII6 198 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 DHDHQ9UQ10 334 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 POMPQ9Y244 141 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 DUOX1Q9NRD9 1551 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 A0A1W2PPK0 400 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 ZNF701M0R085 212 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 SLC7A4O43246 635 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 BCAS2O75934 225 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 IFNA5P01569 189 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 PRPS1L1P21108 318 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 DNAJB1P25685 340 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 CSNK2A1P68400 391 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 GAS6Q14393 721 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 GRIN2CQ14957 1233 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 ZNF829Q3KNS6 432 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 PLEKHO2Q8TD55 490 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 C12orf42Q96LP6 360 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 SAMD10Q9BYL1 202 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 NXF5Q9H1B4 397 aaKnown RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 C12orf49Q9H741 205 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 NAALAD2Q9Y3Q0 740 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 MANBAO00462 879 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 DENRO43583 198 aaKnown RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 ATG12O94817 140 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 PNMTP11086 282 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 RAB3BP20337 219 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 S100A7P31151 101 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 RPL13AP40429 203 aaKnown RBP10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 KCNC4Q03721 635 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 SHHQ15465 462 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 ZBED5Q49AG3 693 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 BCL2L15Q5TBC7 163 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 CLDN19Q8N6F1 224 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 IQCF1Q8N6M8 205 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 PROKR1Q8TCW9 393 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 RAB2BQ8WUD1 216 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 SPOCK2Q92563 424 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 BMFQ96LC9 184 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 SLC2A11Q9BYW1 496 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 MICAL3Q7RTP6 2002 aa10.43□□□□□ -0.74
CACNA1C-216ENST00000399638 SLC9B1P1A6NJY1 282 aa10.42□□□□□ -0.74
CACNA1C-216ENST00000399638 AQP9O43315 295 aa10.42□□□□□ -0.74
CACNA1C-216ENST00000399638 HTR3BO95264 441 aa10.42□□□□□ -0.74
CACNA1C-216ENST00000399638 ERVK-8P63133 956 aa10.42□□□□□ -0.74
CACNA1C-216ENST00000399638 FN3KRPQ9HA64 309 aa10.42□□□□□ -0.74
CACNA1C-216ENST00000399638 CLEC4EQ9ULY5 219 aa10.42□□□□□ -0.74
CACNA1C-216ENST00000399638 DISC1C4P0D8 188 aa10.42□□□□□ -0.74
CACNA1C-216ENST00000399638 SGK494L7N484 410 aa10.42□□□□□ -0.74
CACNA1C-216ENST00000399638 TNFSF15O95150 251 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms