RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ACSS1Q9NUB1 689 aaPredicted RBP12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 RYDENQ9NUL5 291 aaKnown RBP12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 NOP53Q9NZM5 478 aaKnown RBP12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TNFRSF10DQ9UBN6 386 aa12.92□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ICE1Q9Y2F5 2266 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SPTBN1Q01082 2364 aaKnown RBP12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 DOPEY1Q5JWR5 2465 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 GTF3C1Q12789 2109 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 A0A1B0GUH1 482 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 A1L4Q6 167 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CCL21O00585 134 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TRIM3O75382 744 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SASH3O75995 380 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PRKAG1P54619 331 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 OCRLQ01968 901 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 MAD2L1Q13257 205 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CPTPQ5TA50 214 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 Q6ZPB1 254 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 RGS9BPQ6ZS82 235 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 NUP54Q7Z3B4 507 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SZRD1Q7Z422 152 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 FAM109AQ8N4B1 249 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZFP28Q8NHY6 868 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 GNRHR2Q96P88 292 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SECISBP2Q96T21 854 aaKnown RBP12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SH3GL2Q99962 352 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 WDR55Q9H6Y2 383 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZNF703Q9H7S9 590 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 METTL7AQ9H8H3 244 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 GALNT9Q9HCQ5 603 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 BOKQ9UMX3 212 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 OR10H1Q9Y4A9 318 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 HRH3Q9Y5N1 445 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 EXPH5Q8NEV8 1989 aa12.91□□□□□ -0.34
HLA-DQB1-202ENST00000399079 NBPF19A0A087WUL8 3843 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 GOLGA8QA0A0J9YX86 632 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 A0A1W2PRB8 838 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 GOLGA8OA6NCC3 632 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 OR6C70A6NIJ9 312 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 GOLGA8NF8WBI6 632 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TSPAN2O60636 221 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ICOSLGO75144 302 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PRPS1L1P21108 318 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 EPHA3P29320 983 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PTGS2P35354 604 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PTGDSP41222 190 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CLDN8P56748 225 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 GAB1Q13480 694 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SLC10A1Q14973 349 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SMU1Q2TAY7 513 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TBCELQ5QJ74 424 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 TMEM198Q66K66 360 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ARHGAP11AQ6P4F7 1023 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 NCCRP1Q6ZVX7 275 aaPredicted RBP12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 LARP4Q71RC2 724 aaKnown RBP eCLIP12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PACS2Q86VP3 889 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 DOLPP1Q86YN1 238 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 WDR75Q8IWA0 830 aaKnown RBP12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 KIRREL3Q8IZU9 778 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 NUP43Q8NFH3 380 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 RAB3IL1Q8TBN0 382 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZNF75CPQ92670 426 aaPredicted RBP12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 NTNG2Q96CW9 530 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 COQ8BQ96D53 544 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 CCDC120Q96HB5 630 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ZNF597Q96LX8 424 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 COL21A1Q96P44 957 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 PHF12Q96QT6 1004 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 VIPAS39Q9H9C1 493 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 SIRT3Q9NTG7 399 aaPredicted RBP12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 ASIC5Q9NY37 505 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 DNAJC13O75165 2243 aa12.9□□□□□ -0.34
HLA-DQB1-202ENST00000399079 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 NPIPA2E9PIF3 369 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 NPIPA3F8WFD2 350 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SDHDO14521 159 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GNB5O14775 395 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 HDAC3O15379 428 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SNX4O95219 450 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 IGHG3P01860 377 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TPOP07202 933 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 LBPP18428 481 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 IL12BP29460 328 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 RPL3P39023 403 aaKnown RBP12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 MASP1P48740 699 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CASP6P55212 293 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 RPP38P78345 283 aaKnown RBP12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PGS1Q32NB8 556 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 CD163Q86VB7 1156 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 TRIM42Q8IWZ5 723 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GOLGA6L1Q8N7Z2 621 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 FBXO30Q8TB52 745 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 PIK3R3Q92569 461 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 FAM120BQ96EK7 910 aaKnown RBP12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 GIMAP5Q96F15 307 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SLC35A4Q96G79 324 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 ATAD3AQ9NVI7 634 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 KLRF1Q9NZS2 232 aa12.89□□□□□ -0.35
HLA-DQB1-202ENST00000399079 SNX8Q9Y5X2 465 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms