RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 KLF4O43474 513 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 UGT2B11O75310 529 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 SOD3P08294 240 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 CCDC166P0CW27 439 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 PPP3CBP16298 524 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 TBXA2RP21731 343 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 IVDP26440 423 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 ACTG1P63261 375 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 HMGCS1Q01581 520 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 CUL3Q13618 768 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 DDX39BQ13838 428 aaKnown RBP8.47□□□□□ -1.05
NEDD9-203ENST00000397378 MORF4L2Q15014 288 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 MIDNQ504T8 468 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 HP1BP3Q5SSJ5 553 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-203ENST00000397378 C6orf163Q5TEZ5 329 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 FAM166AQ6J272 317 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 CHMP1BQ7LBR1 199 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 DEPDC4Q8N2C3 294 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 SPATA6LQ8N4H0 392 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 GBP7Q8N8V2 638 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-203ENST00000397378 OR4K14Q8NGD5 310 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 RDH11Q8TC12 318 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 UBTD2Q8WUN7 234 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 TSPAN17Q96FV3 270 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 ZNF845Q96IR2 970 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-203ENST00000397378 SFXN2Q96NB2 322 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 MTERF1Q99551 399 aaKnown RBP8.47□□□□□ -1.05
NEDD9-203ENST00000397378 TMEM204Q9BSN7 226 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 KLHL4Q9C0H6 718 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 HEY2Q9UBP5 337 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 ASIC3Q9UHC3 531 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 DTX4Q9Y2E6 619 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 MAGED1Q9Y5V3 778 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-203ENST00000397378 PLCE1Q9P212 2302 aa8.47□□□□□ -1.05
NEDD9-203ENST00000397378 TENM1Q9UKZ4 2725 aa8.46□□□□□ -1.05
NEDD9-203ENST00000397378 OR6C70A6NIJ9 312 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 PGRMC1O00264 195 aaKnown RBP8.46□□□□□ -1.06
NEDD9-203ENST00000397378 TO15178 435 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 ZIC3O60481 467 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 TNFRSF21O75509 655 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 S100BP04271 92 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-203ENST00000397378 THBDP07204 575 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 IGHV4-31P0DP07 118 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 PEPDP12955 493 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 CPMP14384 443 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 PORP16435 677 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-203ENST00000397378 CNTFP26441 200 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 CDC25BP30305 580 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 XKP51811 444 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 B3GALT5-AS1P59052 145 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 PHEXP78562 749 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 LOXL1Q08397 574 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-203ENST00000397378 PLCXD2Q0VAA5 305 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 MAP4K2Q12851 820 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 GUSBP1Q15486 140 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 PDCD2Q16342 344 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-203ENST00000397378 NNATQ16517 81 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 LIPJQ5W064 366 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 CLEC2AQ6UVW9 174 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 ZNF610Q8N9Z0 462 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 FBXW5Q969U6 566 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 REPS1Q96D71 796 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 TMCO6Q96DC7 493 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 UBXN10Q96LJ8 280 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 RNF122Q9H9V4 155 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 NUDT4Q9NZJ9 180 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 OPTCQ9UBM4 332 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 ZNF639Q9UID6 485 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 FBXL2Q9UKC9 423 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 MALRD1Q5VYJ5 2156 aa8.46□□□□□ -1.06
NEDD9-203ENST00000397378 GOLGA6L10A0A0M3HER8 536 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 A0A1W2PP18 115 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 SLC35F4A4IF30 521 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 H0YIV9 168 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 FOXE1O00358 373 aaPredicted RBP8.45□□□□□ -1.06
NEDD9-203ENST00000397378 PHGDHO43175 533 aaKnown RBP8.45□□□□□ -1.06
NEDD9-203ENST00000397378 DLX3O60479 287 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 UGDHO60701 494 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 SEMA3DO95025 777 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 THBS1P07996 1170 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 EPB42P16452 691 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 NT5EP21589 574 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 DRD5P21918 477 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 PPICP45877 212 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 NUDT6P53370 316 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 CLDN15P56746 228 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 EEFSECP57772 596 aaKnown RBP8.45□□□□□ -1.06
NEDD9-203ENST00000397378 SIRPAP78324 504 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 MGAT2Q10469 447 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 PRICKLE4Q2TBC4 344 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 PRR31Q5SQ13 230 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 ADAM5Q6NVV9 412 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 NUDT13Q86X67 352 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 WFDC8Q8IUA0 241 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 PLD6Q8N2A8 252 aaKnown RBP8.45□□□□□ -1.06
NEDD9-203ENST00000397378 SPC24Q8NBT2 197 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 STAG3L4Q8TBR4 150 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 SMAP2Q8WU79 429 aaPredicted RBP8.45□□□□□ -1.06
NEDD9-203ENST00000397378 RNF138Q8WVD3 245 aa8.45□□□□□ -1.06
NEDD9-203ENST00000397378 FIG4Q92562 907 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms