RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 RNF11Q9Y3C5 154 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 SAR1BQ9Y6B6 198 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 MXRA5Q9NR99 2828 aa7.95□□□□□ -1.14
CAPN3-208ENST00000397204 FBN1P35555 2871 aaKnown RBP7.95□□□□□ -1.14
CAPN3-208ENST00000397204 A0A087X1B8 175 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 A0A1W2PS29 197 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 C1orf226A1L170 272 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 GOLGA6L10A6NI86 522 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 H0Y3Z8 333 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 CTIFO43310 598 aaKnown RBP7.94□□□□□ -1.14
CAPN3-208ENST00000397204 GHRHP01286 108 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 GBAP04062 536 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 KLK1P06870 262 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 GFAPP14136 432 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 CSNK2A2P19784 350 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-208ENST00000397204 SRD5A2P31213 254 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 DEKP35659 375 aaKnown RBP7.94□□□□□ -1.14
CAPN3-208ENST00000397204 PTGDSP41222 190 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 MC3RP41968 323 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 GFRA1P56159 465 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 GPX6P59796 221 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 SRYQ05066 204 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 NAB1Q13506 487 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 GTF2H2Q13888 395 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 PRICKLE4Q2TBC4 344 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 KBTBD12Q3ZCT8 623 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 CCNYL2Q5T2Q4 361 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 FRG2Q64ET8 278 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 GTF2H2CQ6P1K8 395 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 CMC1Q7Z7K0 106 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 IFNEQ86WN2 208 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 PLCZ1Q86YW0 608 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 PRR22Q8IZ63 422 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 PPM1NQ8N819 430 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 SIMC1Q8NDZ2 872 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 CTHRC1Q96CG8 243 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 TMCO6Q96DC7 493 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 FRG2BQ96QU4 278 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 NODALQ96S42 347 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 LRRC1Q9BTT6 524 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 G6PC3Q9BUM1 346 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 OSBPL11Q9BXB4 747 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 SERHLQ9NQF3 203 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 ZNF226Q9NYT6 803 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 TAS2R10Q9NYW0 307 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 KLRF1Q9NZS2 232 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 CLCF1Q9UBD9 225 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 BCAP29Q9UHQ4 241 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 ZNF639Q9UID6 485 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 CES1P1Q9UKY3 287 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 DLGAP4Q9Y2H0 992 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 TESMINQ9Y4I5 508 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 PCDHA9Q9Y5H5 950 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 DOCK7Q96N67 2140 aa7.94□□□□□ -1.14
CAPN3-208ENST00000397204 NCKAP5O14513 1909 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 NBEAL1Q6ZS30 2694 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 PRAMEF25A6NGN4 478 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 OR6C70A6NIJ9 312 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 H7C1Q1 480 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 PLOD2O00469 737 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 TO15178 435 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 UGT2B11O75310 529 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 TNFSF13O75888 250 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 KLHL2O95198 593 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 ATP1B1P05026 303 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 C2P06681 752 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 CD79BP40259 229 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 MAGEA4P43358 317 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 EIF1AXP47813 144 aaKnown RBP7.93□□□□□ -1.14
CAPN3-208ENST00000397204 STARP49675 285 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 LHX2P50458 406 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 MAPK12P53778 367 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 RAC1P63000 192 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 HMGCS1Q01581 520 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 CAV1Q03135 178 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 FAM27E3Q08E93 113 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 PLCXD2Q0VAA5 305 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 SLMAPQ14BN4 828 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 ACKR1Q16570 336 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 Q5PR19 223 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 OR2A2Q6IF42 318 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 SLC48A1Q6P1K1 146 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 FAM111BQ6SJ93 734 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 CHMP1BQ7LBR1 199 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 GOLGA7Q7Z5G4 137 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 PRIMA1Q86XR5 153 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 CENPLQ8N0S6 344 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-208ENST00000397204 METTL4Q8N3J2 472 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 GBP7Q8N8V2 638 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-208ENST00000397204 KCTD4Q8WVF5 259 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 ATP6V1E2Q96A05 226 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 STARD4Q96DR4 205 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 OMA1Q96E52 524 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 WFIKKN1Q96NZ8 548 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 COL21A1Q96P44 957 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 SLC39A3Q9BRY0 314 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 NTMT1Q9BV86 223 aa7.93□□□□□ -1.14
CAPN3-208ENST00000397204 NOL11Q9H8H0 719 aaKnown RBP7.93□□□□□ -1.14
CAPN3-208ENST00000397204 GALNT9Q9HCQ5 603 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms