RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CDH23Q9H251 3354 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 CLDN4O14493 209 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 GABARAPO95166 117 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 IFI6P09912 130 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 ST6GAL1P15907 406 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 CD36P16671 472 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 AVPR1BP47901 424 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 FASLGP48023 281 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 ZNHIT3Q15649 155 aaPredicted RBP15.11■□□□□ 0.01
SNX6-202ENST00000396526 DGUOKQ16854 277 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 LAIR1Q6GTX8 287 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 FAM111BQ6SJ93 734 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 CD300LDQ6UXZ3 194 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 VRK2Q86Y07 508 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 SDR16C5Q8N3Y7 309 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 ARL14Q8N4G2 192 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 PIGXQ8TBF5 258 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 GNPDA2Q8TDQ7 276 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 PMM1Q92871 262 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 SPACA7Q96KW9 195 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 IL21RQ9HBE5 538 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 DUSP22Q9NRW4 184 aa15.11■□□□□ 0.01
SNX6-202ENST00000396526 RPL36Q9Y3U8 105 aaKnown RBP15.11■□□□□ 0.01
SNX6-202ENST00000396526 BLACEA4D250 179 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 FAM227AF5H4B4 570 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 LDB3O75112 727 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 SOX14O95416 240 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 RNH1P13489 461 aaKnown RBP15.1■□□□□ 0.01
SNX6-202ENST00000396526 SNRPGP62308 76 aaKnown RBP15.1■□□□□ 0.01
SNX6-202ENST00000396526 MOGQ16653 247 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 HMGN2P46Q86SG4 172 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 RANBP3LQ86VV4 465 aaPredicted RBP15.1■□□□□ 0.01
SNX6-202ENST00000396526 CCDC103Q8IW40 242 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 CA13Q8N1Q1 262 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 TEX47Q8TBZ9 253 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 GAB3Q8WWW8 586 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 RBM18Q96H35 190 aaKnown RBP15.1■□□□□ 0.01
SNX6-202ENST00000396526 MCHR1Q99705 422 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 ARHGDIGQ99819 225 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 QRSL1Q9H0R6 528 aaKnown RBP15.1■□□□□ 0.01
SNX6-202ENST00000396526 UCK1Q9HA47 277 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 CTPS2Q9NRF8 586 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 TBC1D23Q9NUY8 699 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 MASP1P48740 699 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 MAZP56270 477 aaKnown RBP15.1■□□□□ 0.01
SNX6-202ENST00000396526 BNIP3Q12983 259 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 TIGD6Q17RP2 521 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 PUS10Q3MIT2 529 aaKnown RBP15.1■□□□□ 0.01
SNX6-202ENST00000396526 LEXMQ3ZCV2 418 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 DEFB119Q8N690 84 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 GPR151Q8TDV0 419 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 IL4I1Q96RQ9 567 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 STACQ99469 402 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 DSPPQ9NZW4 1301 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 FANCMQ8IYD8 2048 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 SLC9B1P1A6NJY1 282 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 SGK494L7N484 410 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 CLPXO76031 633 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 DBIP07108 87 aaKnown RBP15.1■□□□□ 0.01
SNX6-202ENST00000396526 SMSP52788 366 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 PDX1P52945 283 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 RPL6Q02878 288 aaKnown RBP15.1■□□□□ 0.01
SNX6-202ENST00000396526 STX4Q12846 297 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 NR1D2Q14995 579 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 ZNF628Q5EBL2 1059 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 MEDAGQ5VYS4 303 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 C1orf94Q6P1W5 598 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 TMEFF1Q8IYR6 380 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 ZNF675Q8TD23 568 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 GPR83Q9NYM4 423 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 MRPS2Q9Y399 296 aaKnown RBP15.1■□□□□ 0.01
SNX6-202ENST00000396526 COL4A2P08572 1712 aa15.1■□□□□ 0.01
SNX6-202ENST00000396526 LILRA5A6NI73 299 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 FGF17O60258 216 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 STSP08842 583 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 SLC35E2P0CK97 266 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 NR4A1P22736 598 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 C21orf33P30042 268 aaPredicted RBP15.09■□□□□ 0.01
SNX6-202ENST00000396526 GPR68Q15743 365 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 TRMT12Q53H54 448 aaKnown RBP15.09■□□□□ 0.01
SNX6-202ENST00000396526 BORCS5Q969J3 196 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 REV1Q9UBZ9 1251 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 SATB2Q9UPW6 733 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 ZNF443Q9Y2A4 671 aaPredicted RBP15.09■□□□□ 0.01
SNX6-202ENST00000396526 HYKKA2RU49 373 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 CYR61O00622 381 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 THBS1P07996 1170 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 GABRB1P18505 474 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.09■□□□□ 0.01
SNX6-202ENST00000396526 DUSP5Q16690 384 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 ADCK1Q86TW2 530 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 SFTPA2Q8IWL1 248 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 ZNF619Q8N2I2 560 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 SLC38A2Q96QD8 506 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 SDF2Q99470 211 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 RHNO1Q9BSD3 238 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 SOHLH2Q9NX45 425 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 TVP23BQ9NYZ1 205 aa15.09■□□□□ 0.01
SNX6-202ENST00000396526 CLDN24A6NM45 220 aa15.08■□□□□ 0.01
SNX6-202ENST00000396526 CPSF4LA6NMK7 179 aaKnown RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms