RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CR1LQ2VPA4 569 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 TMEM35AQ53FP2 167 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 HSP90AA5PQ58FG0 334 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 HLA-DQA1Q5Y7H0 255 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 DRICH1Q6PGQ1 229 aaPredicted RBP12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 CHMP1BQ7LBR1 199 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 UBQLNLQ8IYU4 475 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 C3orf56Q8N813 242 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 PPM1NQ8N819 430 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 EIF1ADQ8N9N8 165 aaKnown RBP12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 PIWIL2Q8TC59 973 aaKnown RBP12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 ADAD1Q96M93 576 aaKnown RBP12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 TACO1Q9BSH4 297 aaKnown RBP12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 C20orf96Q9NUD7 363 aaPredicted RBP12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 KLRF1Q9NZS2 232 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 ARMCX1Q9P291 453 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 PCNX3Q9H6A9 2034 aa12.19□□□□□ -0.46
VCPKMT-201ENST00000395859 GOLGA8QA0A0J9YX86 632 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 GOLGA6L10A0A0M3HER8 536 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 GOLGA8OA6NCC3 632 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 PABPN1LA6NDY0 278 aaKnown RBP12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 GOLGA8NF8WBI6 632 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 GOLGA8RI6L899 631 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 AHSGP02765 367 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 ALDOAP04075 364 aaKnown RBP12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 EPORP19235 508 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 PTNP21246 168 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 MAGEA3P43357 314 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 SLC6A8P48029 635 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 CLDN20P56880 219 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 EEFSECP57772 596 aaKnown RBP12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 AP5B1Q2VPB7 878 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 ANKRD22Q5VYY1 191 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 MRM1Q6IN84 353 aaKnown RBP12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 WDR93Q6P2C0 686 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 BEND4Q6ZU67 534 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 GPR180Q86V85 440 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 ZCCHC7Q8N3Z6 543 aaKnown RBP12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 SPATA4Q8NEY3 305 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 OMA1Q96E52 524 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 GMPPAQ96IJ6 420 aaPredicted RBP12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 ZNF717Q9BY31 904 aaPredicted RBP12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 FAIMQ9NVQ4 179 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 ZNF337Q9Y3M9 751 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 ASB4Q9Y574 426 aa12.18□□□□□ -0.46
VCPKMT-201ENST00000395859 A0A0A6YYJ9 748 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 CCDC151A5D8V7 595 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 SDR42E2A6NKP2 422 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 C17orf51A8MQB3 221 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 SLCO1B7G3V0H7 640 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 KIAA0513O60268 411 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 ERLIN1O75477 346 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 MLNP12872 115 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 C21orf58P58505 322 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 DOC2AQ14183 400 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 AGAP6Q5VW22 663 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 OR4C11Q6IEV9 310 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 CNTN4Q8IWV2 1026 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 GALNT12Q8IXK2 581 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 GABRG1Q8N1C3 465 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 STEAP2Q8NFT2 490 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 OR7G1Q8NGA0 311 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 HTRA1Q92743 480 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 PTCD3Q96EY7 689 aaKnown RBP12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 TMEM79Q9BSE2 394 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 SOX7Q9BT81 388 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 FAM167BQ9BTA0 163 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 CAPS2Q9BXY5 557 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 IARS2Q9NSE4 1012 aaKnown RBP12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 ASIC3Q9UHC3 531 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 PHF11Q9UIL8 331 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 EMC9Q9Y3B6 208 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 OARD1Q9Y530 152 aa12.17□□□□□ -0.46
VCPKMT-201ENST00000395859 A0A1W2PR48 441 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 FAM157AC9JC47 383 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 H7C417 338 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 ACOX3O15254 700 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 TMPRSS2O15393 492 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 TAPBPO15533 448 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 ATP8B1O43520 1251 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 FESP07332 822 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 CSF3P09919 207 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 FCGR2AP12318 317 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 KRT15P19012 456 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 GGT5P36269 586 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 SSR2P43308 183 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 MGAT2Q10469 447 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 NNATQ16517 81 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 DEPDC1Q5TB30 811 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 FIGNL1Q6PIW4 674 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 GALNT7Q86SF2 657 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 LAS2Q8IYD9 372 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 GBP7Q8N8V2 638 aaPredicted RBP12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 FADS6Q8N9I5 356 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 HSD17B8Q92506 261 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 KAT2AQ92830 837 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 SIGLEC10Q96LC7 697 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 EFCAB11Q9BUY7 163 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 HDHD5Q9BXW7 423 aa12.16□□□□□ -0.46
VCPKMT-201ENST00000395859 NGBQ9NPG2 151 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms