RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 FOLH1BQ9HBA9 442 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 DDX18Q9NVP1 670 aaKnown RBP12.56□□□□□ -0.4
CXCL12-205ENST00000395794 Q9UFV3 132 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 MRTO4Q9UKD2 239 aaKnown RBP12.56□□□□□ -0.4
CXCL12-205ENST00000395794 MAPRE3Q9UPY8 281 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 CAMK2AQ9UQM7 478 aa12.56□□□□□ -0.4
CXCL12-205ENST00000395794 GTF3C1Q12789 2109 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 A0A087WV62 115 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 C2orf72A6NCS6 295 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 NPHS1O60500 1241 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 TOXO94900 526 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 ACTL6AO96019 429 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 DDX5P17844 614 aaKnown RBP12.55□□□□□ -0.4
CXCL12-205ENST00000395794 PRPH2P23942 346 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 PTPN6P29350 595 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 SOX18P35713 384 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 MC3RP41968 323 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 PNLIPRP2P54317 469 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 CRYZQ08257 329 aaKnown RBP12.55□□□□□ -0.4
CXCL12-205ENST00000395794 SLC25A35Q3KQZ1 300 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 WIPI1Q5MNZ9 446 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-205ENST00000395794 SH2D4BQ5SQS7 431 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 RIPPLY2Q5TAB7 128 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 FNDC7Q5VTL7 733 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 TMEM107Q6UX40 140 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 FAM83FQ8NEG4 500 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-205ENST00000395794 OR14L1PQ8NHC6 308 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.55□□□□□ -0.4
CXCL12-205ENST00000395794 ABTB1Q969K4 478 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-205ENST00000395794 C14orf79Q96F83 325 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 LRRC46Q96FV0 321 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 SLC35A4Q96G79 324 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 GALNT9Q9HCQ5 603 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 TNFRSF12AQ9NP84 129 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 SERHLQ9NQF3 203 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 LGALS13Q9UHV8 139 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 EXO1Q9UQ84 846 aaKnown RBP12.55□□□□□ -0.4
CXCL12-205ENST00000395794 SLC6A5Q9Y345 797 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 TMED5Q9Y3A6 229 aa12.55□□□□□ -0.4
CXCL12-205ENST00000395794 NCOA6Q14686 2063 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-205ENST00000395794 PLOD2O00469 737 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 SPAG7O75391 227 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 IL2RAP01589 272 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 LINC00032P0C843 101 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 BMP7P18075 431 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 MSX1P28360 303 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 ALDH3A1P30838 453 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 GPC1P35052 558 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 ADH7P40394 386 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 CLK3P49761 638 aaKnown RBP12.54□□□□□ -0.4
CXCL12-205ENST00000395794 TLE4Q04727 773 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 RCAN2Q14206 197 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 DECR1Q16698 335 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 CYP27C1Q4G0S4 372 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 EIPR1Q53HC9 387 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 NHSL2Q5HYW2 709 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 KANK2Q63ZY3 851 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 VASNQ6EMK4 673 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 DESI1Q6ICB0 168 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 WDR93Q6P2C0 686 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 ENPP6Q6UWR7 440 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 RNF165Q6ZSG1 346 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 WDR53Q7Z5U6 358 aaPredicted RBP12.54□□□□□ -0.4
CXCL12-205ENST00000395794 YRDCQ86U90 279 aaKnown RBP12.54□□□□□ -0.4
CXCL12-205ENST00000395794 PLCZ1Q86YW0 608 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 LACC1Q8IV20 430 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 ZNF295-AS1Q8N0V1 137 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 ZFP28Q8NHY6 868 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 AENQ8WTP8 325 aaKnown RBP12.54□□□□□ -0.4
CXCL12-205ENST00000395794 CAVIN3Q969G5 261 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 GFM2Q969S9 779 aaKnown RBP12.54□□□□□ -0.4
CXCL12-205ENST00000395794 PPCDCQ96CD2 204 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 LURAP1Q96LR2 239 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 AMDHD1Q96NU7 426 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 CCT7Q99832 543 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 GLIPR2Q9H4G4 154 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 C3orf14Q9HBI5 128 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 Q9N2J8 555 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 C19orf53Q9UNZ5 99 aaPredicted RBP12.54□□□□□ -0.4
CXCL12-205ENST00000395794 TRAF6Q9Y4K3 522 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 CCL27Q9Y4X3 112 aa12.54□□□□□ -0.4
CXCL12-205ENST00000395794 CACNA1DQ01668 2161 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 TTC36A6NLP5 189 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 NPIPB8E9PQR5 432 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 DVL2O14641 736 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 PDPK1O15530 556 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 AKAP10O43572 662 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 TSPAN2O60636 221 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 NME6O75414 186 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-205ENST00000395794 EPPINO95925 133 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 FGF4P08620 206 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 CAPN3P20807 821 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 MAPK1P28482 360 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 SERPINB5P36952 375 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 ASMTP46597 345 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 PSMD4P55036 377 aaKnown RBP12.53□□□□□ -0.4
CXCL12-205ENST00000395794 RPL38P63173 70 aaKnown RBP12.53□□□□□ -0.4
CXCL12-205ENST00000395794 TFF3Q07654 80 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 KIAA0040Q15053 153 aa12.53□□□□□ -0.4
CXCL12-205ENST00000395794 GALNTL6Q49A17 601 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms