RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 PRAMEF20Q5VT98 475 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 ZNF787Q6DD87 383 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 OGFOD2Q6N063 350 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 ANKRD26P1Q6NSI1 321 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 TMEM107Q6UX40 140 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 HDXQ7Z353 690 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 CAMKMTQ7Z624 323 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 PRR22Q8IZ63 422 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 FAM109AQ8N4B1 249 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 NATD1Q8N6N6 113 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 OR7A2PQ8NGA2 310 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 COQ8BQ96D53 544 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 TMEM41AQ96HV5 264 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 ATP6V1G3Q96LB4 118 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 LMF2Q9BU23 707 aaKnown RBP12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 C1orf50Q9BV19 199 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 AKTIPQ9H8T0 292 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 ZFP64Q9NPA5 681 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 PNPOQ9NVS9 261 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 ARGLU1Q9NWB6 273 aaPredicted RBP12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 NOP53Q9NZM5 478 aaKnown RBP12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 SH3BP4Q9P0V3 963 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 BOKQ9UMX3 212 aaPredicted RBP12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 MAPRE3Q9UPY8 281 aa12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 EIF3LQ9Y262 564 aaKnown RBP12.25□□□□□ -0.45
HLA-DMA-202ENST00000395303 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 SDHDO14521 159 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 LRRTM2O43300 516 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 ABCB7O75027 752 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 UGT2B11O75310 529 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 SNX4O95219 450 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 PRPS1L1P21108 318 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 DCTP40126 519 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 PTGDSP41222 190 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 PNLIPRP2P54317 469 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 PER3P56645 1201 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 CORO7P57737 925 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 KCNJ2P63252 427 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 HSF1Q00613 529 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 PLCXD2Q0VAA5 305 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 HSPB3Q12988 150 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 SNTA1Q13424 505 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 C3AR1Q16581 482 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 TTMPQ5BVD1 217 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 EXOSC6Q5RKV6 272 aaKnown RBP12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 FNDC7Q5VTL7 733 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 C1QL3Q5VWW1 255 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 ATG16L1Q676U5 607 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 PAOXQ6QHF9 649 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 LARP4Q71RC2 724 aaKnown RBP eCLIP12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 MAMDC2Q7Z304 686 aaPredicted RBP12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 HEATR5AQ86XA9 2040 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 INTS1Q8N201 2190 aaKnown RBP12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 OR5M3Q8NGP4 307 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 PSMA8Q8TAA3 256 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 MGARPQ8TDB4 240 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 DIO2Q92813 273 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 GIMAP5Q96F15 307 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 MAGED4Q96JG8 741 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 ZNF597Q96LX8 424 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 DOCK7Q96N67 2140 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 NODALQ96S42 347 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 DOHHQ9BU89 302 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 ZNF703Q9H7S9 590 aaPredicted RBP12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 MANSC1Q9H8J5 431 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 DDX18Q9NVP1 670 aaKnown RBP12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 APCP25054 2843 aa12.24□□□□□ -0.45
HLA-DMA-202ENST00000395303 A0A1B0GTH9 108 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 FAM166BA8MTA8 275 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 SLCO1B7G3V0H7 640 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 SUSD5O60279 629 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 NME6O75414 186 aaPredicted RBP12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 LAMP1P11279 417 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 G6PDP11413 515 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 MAGEA5P43359 124 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 CDK9P50750 372 aaKnown RBP12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 MANFP55145 182 aaKnown RBP12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 ZNF155Q12901 538 aaPredicted RBP12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 CYP27C1Q4G0S4 372 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 BICRALQ6AI39 1079 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 DESI1Q6ICB0 168 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 SLC30A6Q6NXT4 461 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 ARHGAP11AQ6P4F7 1023 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 TRILQ7L0X0 811 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 FJX1Q86VR8 437 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 SLC44A2Q8IWA5 706 aaPredicted RBP12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 CEP70Q8NHQ1 597 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 FAM57AQ8TBR7 257 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 TMBIM1Q969X1 311 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 RILPQ96NA2 401 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 COL21A1Q96P44 957 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 NUF2Q9BZD4 464 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 BHLHE41Q9C0J9 482 aaPredicted RBP12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 DEFB127Q9H1M4 99 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 UBQLN3Q9H347 655 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 ACKR4Q9NPB9 350 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 SIRT3Q9NTG7 399 aaPredicted RBP12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 ATAD3AQ9NVI7 634 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 MED12LQ86YW9 2145 aa12.23□□□□□ -0.45
HLA-DMA-202ENST00000395303 HCFC1P51610 2035 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms