RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 ALG8Q9BVK2 526 aa16.34■□□□□ 0.21
SIN3A-203ENST00000394949 BACE2Q9Y5Z0 518 aa16.34■□□□□ 0.21
SIN3A-203ENST00000394949 COL2A1P02458 1487 aaPredicted RBP16.33■□□□□ 0.21
SIN3A-203ENST00000394949 ACOT7O00154 380 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 SFTPBP07988 381 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 CASRP41180 1078 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 RAB11BQ15907 218 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 GKN2Q86XP6 184 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 CBARPQ8N350 705 aaPredicted RBP16.33■□□□□ 0.21
SIN3A-203ENST00000394949 DNAJC22Q8N4W6 341 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 ELP5Q8TE02 316 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 ISL2Q96A47 359 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 FAM46AQ96IP4 442 aaKnown RBP16.33■□□□□ 0.21
SIN3A-203ENST00000394949 CNTNAP3BQ96NU0 1288 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 SLC6A7Q99884 636 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 GPR62Q9BZJ7 368 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 EIF5A2Q9GZV4 153 aaKnown RBP16.33■□□□□ 0.21
SIN3A-203ENST00000394949 CCDC86Q9H6F5 360 aaKnown RBP16.33■□□□□ 0.21
SIN3A-203ENST00000394949 ALKBH4Q9NXW9 302 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 MRPL15Q9P015 296 aaKnown RBP16.33■□□□□ 0.21
SIN3A-203ENST00000394949 KLHL42Q9P2K6 505 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 PLAGL1Q9UM63 463 aa16.33■□□□□ 0.21
SIN3A-203ENST00000394949 SLC16A6O15403 523 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 LDB2O43679 373 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 GJB5O95377 273 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 TRAPPC2P0DI81 140 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 TRAPPC2BP0DI82 140 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 TNFRSF1BP20333 461 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 GABRB3P28472 473 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 SMPDL3BQ92485 455 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 MED30Q96HR3 178 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 COQ3Q9NZJ6 369 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 CD300AQ9UGN4 299 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 CASC3O15234 703 aaKnown RBP16.33■□□□□ 0.2
SIN3A-203ENST00000394949 VEGFDO43915 354 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 SLC22A5O76082 557 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 ENDOUP21128 410 aaKnown RBP16.33■□□□□ 0.2
SIN3A-203ENST00000394949 PDX1P52945 283 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 SYT6Q5T7P8 510 aaPredicted RBP16.33■□□□□ 0.2
SIN3A-203ENST00000394949 LRRC25Q8N386 305 aaPredicted RBP16.33■□□□□ 0.2
SIN3A-203ENST00000394949 OR7G2Q8NG99 324 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 SORCS1Q8WY21 1168 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 ZNF559Q9BR84 538 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 TCEAL7Q9BRU2 100 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 FN3KQ9H479 309 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 RANGRFQ9HD47 186 aaPredicted RBP16.33■□□□□ 0.2
SIN3A-203ENST00000394949 CREBZFQ9NS37 354 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 C2orf78A6NCI8 922 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 SULT1C2O00338 296 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 GOSR2O14653 212 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 KLK3P07288 261 aaPredicted RBP16.33■□□□□ 0.2
SIN3A-203ENST00000394949 ASGR2P07307 311 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 CSF1P09603 554 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 HLA-EP13747 358 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 S100PP25815 95 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 PRDX3P30048 256 aaKnown RBP16.33■□□□□ 0.2
SIN3A-203ENST00000394949 MMP12P39900 470 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 CDKN1CP49918 316 aaPredicted RBP16.33■□□□□ 0.2
SIN3A-203ENST00000394949 DLX5P56178 289 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 POU4F3Q15319 338 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 CHRFAM7AQ494W8 412 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 BEST4Q8NFU0 473 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 FAM46BQ96A09 425 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 KLHDC7BQ96G42 594 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 MFFQ9GZY8 342 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 SEC61A2Q9H9S3 476 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 EPHA6Q9UF33 1036 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 GPR52Q9Y2T5 361 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 TMEM98Q9Y2Y6 226 aa16.33■□□□□ 0.2
SIN3A-203ENST00000394949 ALDOBP05062 364 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 BPIP17213 487 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 GKP32189 559 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 PTH2RP49190 550 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 SLAMF1Q13291 335 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 SPIN3Q5JUX0 258 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 TRIB2Q92519 343 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 UBXN10Q96LJ8 280 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 F2RL3Q96RI0 385 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 PRODH2Q9UF12 536 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 LOC105369274A0A096LPK9 316 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 RHOP08100 348 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 BMP1P13497 986 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 GATMP50440 423 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 FAM122CQ6P4D5 195 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 ARSKQ6UWY0 536 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 OR4N4Q8N0Y3 316 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 MTHFD2LQ9H903 347 aaPredicted RBP16.32■□□□□ 0.2
SIN3A-203ENST00000394949 ZFP57Q9NU63 452 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 PIGBOS1A0A0B4J2F0 54 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 ZNF840PA6NDX5 716 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 PRSS3P35030 304 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 LDLRAD1Q5T700 205 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 SLC46A3Q7Z3Q1 461 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 NRMQ8IXM6 262 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 OR5W2Q8NH69 310 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 ZDHHC1Q8WTX9 485 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 ADAMTS14Q8WXS8 1223 aa16.32■□□□□ 0.2
SIN3A-203ENST00000394949 RPL3LQ92901 407 aaKnown RBP16.32■□□□□ 0.2
SIN3A-203ENST00000394949 KCTD12Q96CX2 325 aaKnown RBP16.32■□□□□ 0.2
SIN3A-203ENST00000394949 SIAEQ9HAT2 523 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms