RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 VEGFDO43915 354 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 PRKRAO75569 313 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 PRNPP04156 253 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 GSTM3P21266 225 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 FGF9P31371 208 aaPredicted RBP17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 BUD31P41223 144 aaPredicted RBP17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 MTNR1AP48039 350 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 VASPP50552 380 aaPredicted RBP17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 TYW3Q6IPR3 259 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 SLC27A4Q6P1M0 643 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 CD200R1LQ6Q8B3 271 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 ABI3BPQ7Z7G0 1075 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 GLCCI1Q86VQ1 547 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 C12orf40Q86WS4 652 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 ZNF485Q8NCK3 441 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 ANKK1Q8NFD2 765 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 TEX47Q8TBZ9 253 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 SOSTQ9BQB4 213 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 ARHGAP9Q9BRR9 750 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 DPH7Q9BTV6 452 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 MENTQ9BUN1 341 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 ZNF576Q9H609 170 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 BCL2L10Q9HD36 194 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 TAS2R7Q9NYW3 318 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 GSTK1Q9Y2Q3 226 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 A0A087WUU8 490 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 OR1F1O43749 312 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 LCMT2O60294 686 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 UBXN7O94888 489 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 LALBAP00709 142 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 HLA-DQB1P01920 261 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 KHKP50053 298 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 PPP3R1P63098 170 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 MESP2Q0VG99 397 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 MAP4K2Q12851 820 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 SNAP47Q5SQN1 464 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 CNIH2Q6PI25 160 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 PRICKLE2Q7Z3G6 844 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 C11orf74Q86VG3 221 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 PLA2G15Q8NCC3 412 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 NLGN4YQ8NFZ3 816 aaPredicted RBP17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 DCLRE1CQ96SD1 692 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 AICDAQ9GZX7 198 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 PPP1R3EQ9H7J1 279 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 DDX31Q9H8H2 851 aaKnown RBP17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 DZANK1Q9NVP4 752 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 CLEC1BQ9P126 229 aa17.24■□□□□ 0.35
PCDHA1-202ENST00000394633 VCANP13611 3396 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 A0A0A6YYD5 115 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 A0A1W2PPV9 198 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 KDM4EB2RXH2 506 aaPredicted RBP17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 HPGDSO60760 199 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 NTN1O95631 604 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 HLA-DMAP28067 261 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 MAP2K3P46734 347 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 PRKAG1P54619 331 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 ST8SIA6P61647 398 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 ARHGAP19Q14CB8 494 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 P2RY14Q15391 338 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 ANKRD54Q6NXT1 300 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 TMEM184AQ6ZMB5 413 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 AMZ2Q86W34 360 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 OR5K2Q8NHB8 316 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 RIPOR3Q96MK2 946 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 QRSL1Q9H0R6 528 aaKnown RBP17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 PRO3102Q9H379 93 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 MALT1Q9UDY8 824 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 ADAM29Q9UKF5 820 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 COL6A3P12111 3177 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 DENND4AQ7Z401 1863 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 TRDV1A0A1B0GX56 115 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 CASKO14936 926 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 HCN1O60741 890 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 ALPPL2P10696 532 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 FCARP24071 287 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 NCBP2P52298 156 aaKnown RBP eCLIP17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 DHCR24Q15392 516 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 NDUFAF5Q5TEU4 345 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 OR4C11Q6IEV9 310 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 PAMR1Q6UXH9 720 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 LHFPL3Q86UP9 236 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 GNPDA2Q8TDQ7 276 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 SMARCD2Q92925 531 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 NXPE3Q969Y0 559 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 SPATA5L1Q9BVQ7 753 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 NT5DC2Q9H857 520 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 SLC35C2Q9NQQ7 365 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 TM7SF3Q9NS93 570 aa17.23■□□□□ 0.35
PCDHA1-202ENST00000394633 SNTNA6NMZ2 147 aa17.22■□□□□ 0.35
PCDHA1-202ENST00000394633 NCR1O76036 304 aa17.22■□□□□ 0.35
PCDHA1-202ENST00000394633 ADRB3P13945 408 aa17.22■□□□□ 0.35
PCDHA1-202ENST00000394633 PRKCAP17252 672 aa17.22■□□□□ 0.35
PCDHA1-202ENST00000394633 CPN2P22792 545 aa17.22■□□□□ 0.35
PCDHA1-202ENST00000394633 RPA4Q13156 261 aa17.22■□□□□ 0.35
PCDHA1-202ENST00000394633 ZNF793Q6ZN11 406 aa17.22■□□□□ 0.35
PCDHA1-202ENST00000394633 SUN3Q8TAQ9 357 aa17.22■□□□□ 0.35
PCDHA1-202ENST00000394633 ATF6BQ99941 703 aa17.22■□□□□ 0.35
PCDHA1-202ENST00000394633 B3GAT2Q9NPZ5 323 aa17.22■□□□□ 0.35
PCDHA1-202ENST00000394633 GLOD5A6NK44 160 aa17.21■□□□□ 0.35
PCDHA1-202ENST00000394633 FAM170BA6NMN3 283 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms