RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 CMAHPQ9Y471 501 aa14.64□□□□□ -0.07
PTBP1-204ENST00000394601 TRPM6Q9BX84 2022 aa14.64□□□□□ -0.07
PTBP1-204ENST00000394601 LCMT2O60294 686 aaKnown RBP14.63□□□□□ -0.07
PTBP1-204ENST00000394601 GADD45GO95257 159 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 EPPINO95925 133 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 KELP23276 732 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 EIF4HQ15056 248 aaKnown RBP14.63□□□□□ -0.07
PTBP1-204ENST00000394601 FRMPD2BQ6IN97 320 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 SHFQ7M4L6 423 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 TFGQ92734 400 aaPredicted RBP14.63□□□□□ -0.07
PTBP1-204ENST00000394601 ZNF764Q96H86 408 aaPredicted RBP14.63□□□□□ -0.07
PTBP1-204ENST00000394601 TEX10Q9NXF1 929 aaPredicted RBP14.63□□□□□ -0.07
PTBP1-204ENST00000394601 MRPS23Q9Y3D9 190 aaKnown RBP14.63□□□□□ -0.07
PTBP1-204ENST00000394601 LINC01553A4QN01 128 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 C4orf51C9J302 202 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 C5orf67F2Z3F1 127 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 PPM1DO15297 605 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 CNTN1Q12860 1018 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 ARHGAP19Q14CB8 494 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 MEX3DQ86XN8 651 aaKnown RBP14.63□□□□□ -0.07
PTBP1-204ENST00000394601 SMG7Q92540 1137 aaKnown RBP14.63□□□□□ -0.07
PTBP1-204ENST00000394601 TMEM19Q96HH6 336 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 SLC6A18Q96N87 628 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 QRFPRQ96P65 431 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 TRAF4Q9BUZ4 470 aaPredicted RBP14.63□□□□□ -0.07
PTBP1-204ENST00000394601 CCDC32Q9BV29 185 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 EIF3KQ9UBQ5 218 aaKnown RBP14.63□□□□□ -0.07
PTBP1-204ENST00000394601 PCDHGB2Q9Y5G2 931 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 CCNB2O95067 398 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 SDC2P34741 201 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 MAP2K3P46734 347 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 CDK3Q00526 305 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 RHAGQ02094 409 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 C19orf57Q0VDD7 668 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 MAB21L1Q13394 359 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 MLF2Q15773 248 aaPredicted RBP14.63□□□□□ -0.07
PTBP1-204ENST00000394601 C2orf27AQ580R0 203 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 TOR1AIP1Q5JTV8 583 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 TMEM240Q5SV17 173 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 GARNL3Q5VVW2 1013 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 KCTD20Q7Z5Y7 419 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 CREB3L4Q8TEY5 395 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 OR5P2Q8WZ92 322 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 FGF11Q92914 225 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 PRSS16Q9NQE7 514 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 ANGPT4Q9Y264 503 aa14.63□□□□□ -0.07
PTBP1-204ENST00000394601 LSM2Q9Y333 95 aaKnown RBP14.63□□□□□ -0.07
PTBP1-204ENST00000394601 CKAP5Q14008 2032 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 PRR19A6NJB7 356 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 ELAVL4P26378 380 aaKnown RBP14.62□□□□□ -0.07
PTBP1-204ENST00000394601 SOAT1P35610 550 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 COL9A2Q14055 689 aaPredicted RBP14.62□□□□□ -0.07
PTBP1-204ENST00000394601 LCN1P1Q5VSP4 162 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 TNFAIP8L2Q6P589 184 aaPredicted RBP14.62□□□□□ -0.07
PTBP1-204ENST00000394601 AMZ2Q86W34 360 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 SLC30A8Q8IWU4 369 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 PIGKQ92643 395 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 ASB16Q96NS5 453 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 TEFMQ96QE5 360 aaKnown RBP14.62□□□□□ -0.07
PTBP1-204ENST00000394601 SRRQ9GZT4 340 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 SYNPO2LQ9H987 977 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 ANKHQ9HCJ1 492 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 CTPS2Q9NRF8 586 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 V9GYH0 126 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 LGALS8O00214 317 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 FGBP02675 491 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 BCHEP06276 602 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 IL32P24001 234 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 FCARP24071 287 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 CNR2P34972 360 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 AVPR1BP47901 424 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 CRISP1P54107 249 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 RAB14P61106 215 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 TARDBPQ13148 414 aaKnown RBP eCLIP14.62□□□□□ -0.072e-6■■■□□ 16.5
PTBP1-204ENST00000394601 FCN2Q15485 313 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 SSX1Q16384 188 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 WASH2PQ6VEQ5 465 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 ART5Q96L15 291 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 ERVMER34-1Q9H9K5 563 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 MIEF1Q9NQG6 463 aa14.62□□□□□ -0.07
PTBP1-204ENST00000394601 ZNF624Q9P2J8 865 aaPredicted RBP14.62□□□□□ -0.07
PTBP1-204ENST00000394601 KIAA0100Q14667 2235 aaKnown RBP14.62□□□□□ -0.07
PTBP1-204ENST00000394601 A0A0A6YYD5 115 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 C6orf120Q7Z4R8 191 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 HMGN2P46Q86SG4 172 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 KRT78Q8N1N4 520 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 C12orf76Q8N812 135 aaPredicted RBP14.61□□□□□ -0.07
PTBP1-204ENST00000394601 RAB8BQ92930 207 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 AIFM2Q9BRQ8 373 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 A3GALT2U3KPV4 340 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 INMT-MINDY4F8WBC2 141 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 H7BY64 318 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 MYL12BO14950 172 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 UGT2B17O75795 530 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 IFNW1P05000 195 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 PEPDP12955 493 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 MYL12AP19105 171 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 KCNJ5P48544 419 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 TIMM50Q3ZCQ8 353 aa14.61□□□□□ -0.07
PTBP1-204ENST00000394601 KIAA1161Q6NSJ0 714 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms