RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 HGDQ93099 445 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 GFM2Q969S9 779 aaKnown RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 SARAFQ96BY9 339 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 CCDC120Q96HB5 630 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 C3orf30Q96M34 536 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 RILPQ96NA2 401 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 COL21A1Q96P44 957 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 PRPF18Q99633 342 aaKnown RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 PAIP2Q9BPZ3 127 aaKnown RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 VKORC1Q9BQB6 163 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 OSBPL11Q9BXB4 747 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 DEFB127Q9H1M4 99 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 TP63Q9H3D4 680 aaPredicted RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 METTL7AQ9H8H3 244 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 C3orf14Q9HBI5 128 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 PROK2Q9HC23 129 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 Q9N2J8 555 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 ACKR4Q9NPB9 350 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 NOP53Q9NZM5 478 aaKnown RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 SH3BGRL2Q9UJC5 107 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 TINAGQ9UJW2 476 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 MRTO4Q9UKD2 239 aaKnown RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 MEMO1Q9Y316 297 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 OR10H1Q9Y4A9 318 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 EXPH5Q8NEV8 1989 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 FLNCQ14315 2725 aa11.62□□□□□ -0.55
GGPS1-203ENST00000391855 ASH1LQ9NR48 2969 aaKnown RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 PRRC2CQ9Y520 2896 aaKnown RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 USP9XQ93008 2570 aaPredicted RBP11.62□□□□□ -0.55
GGPS1-203ENST00000391855 PRAMEF25A6NGN4 478 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 FIGNL2A6NMB9 653 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 UPK1AO00322 258 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 REM1O75628 298 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 LRATO95237 230 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 PSMD4P55036 377 aaKnown RBP11.61□□□□□ -0.55
GGPS1-203ENST00000391855 MANFP55145 182 aaKnown RBP11.61□□□□□ -0.55
GGPS1-203ENST00000391855 C21orf58P58505 322 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 PSG6Q00889 435 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 BST1Q10588 318 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 HSPB3Q12988 150 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 PDCD2Q16342 344 aaPredicted RBP11.61□□□□□ -0.55
GGPS1-203ENST00000391855 VPS26BQ4G0F5 336 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 CYP27C1Q4G0S4 372 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 IL23RQ5VWK5 629 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 CES4AQ5XG92 561 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 NPSR1Q6W5P4 371 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 CD163Q86VB7 1156 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 DOLPP1Q86YN1 238 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 TMBIM1Q969X1 311 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 NTNG2Q96CW9 530 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 JSRP1Q96MG2 331 aaPredicted RBP11.61□□□□□ -0.55
GGPS1-203ENST00000391855 SORT1Q99523 831 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 LMF2Q9BU23 707 aaKnown RBP11.61□□□□□ -0.55
GGPS1-203ENST00000391855 LDAHQ9H6V9 325 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 THAP1Q9NVV9 213 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 KLRF1Q9NZS2 232 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 BAIAP2L1Q9UHR4 511 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 RELNP78509 3460 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 PTPN13Q12923 2485 aa11.61□□□□□ -0.55
GGPS1-203ENST00000391855 TRGV5A0A0B4J1U4 118 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 TSPAN2O60636 221 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 UGT2B11O75310 529 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 GDF1P27539 372 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 WDR4P57081 412 aaKnown RBP11.6□□□□□ -0.55
GGPS1-203ENST00000391855 CORO7P57737 925 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 PRR5P85299 388 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 ART3Q13508 389 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 PTGR1Q14914 329 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 DECR1Q16698 335 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 ZNF385BQ569K4 471 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 CPTPQ5TA50 214 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 TMEM211Q6ICI0 200 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 ANKRD26P1Q6NSI1 321 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 ZCCHC12Q6PEW1 402 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 XKRXQ6PP77 449 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 ZNF551Q7Z340 670 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-203ENST00000391855 SLC44A2Q8IWA5 706 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-203ENST00000391855 CDRT4Q8N9R6 151 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 CIDECQ96AQ7 238 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-203ENST00000391855 MS4A4EQ96PG1 132 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 C1orf50Q9BV19 199 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 EXO5Q9H790 373 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 ANKRA2Q9H9E1 313 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 NEUROD4Q9HD90 331 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 NTMQ9P121 344 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 GIMAP2Q9UG22 337 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 C15orf41Q9Y2V0 281 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 PCDHGB3Q9Y5G1 929 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 KLF2Q9Y5W3 355 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-203ENST00000391855 DOPEY1Q5JWR5 2465 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 A1L4Q6 167 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 SLCO1B7G3V0H7 640 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 EMC8O43402 210 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 SNNO75324 88 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-203ENST00000391855 PDE9AO76083 593 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 HPNP05981 417 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 GCKP35557 465 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 CLDN8P56748 225 aa11.6□□□□□ -0.55
GGPS1-203ENST00000391855 LSM12Q3MHD2 195 aaKnown RBP11.6□□□□□ -0.55
GGPS1-203ENST00000391855 BICRALQ6AI39 1079 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms