RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 FAM103A1Q9BTL3 118 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 H2AFJQ9BTM1 129 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 HGH1Q9BTY7 390 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 C1orf50Q9BV19 199 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TSSK1BQ9BXA7 367 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 DUSP16Q9BY84 665 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 B3GNT5Q9BYG0 378 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 RAB34Q9BZG1 259 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 UBA5Q9GZZ9 404 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 WWP1Q9H0M0 922 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 LMAN2LQ9H0V9 348 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 DNTTIP1Q9H147 329 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 OPN3Q9H1Y3 402 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CXCL16Q9H2A7 254 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 DUSP21Q9H596 190 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TAF1DQ9H5J8 278 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 RPP21Q9H633 154 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 C1orf115Q9H7X2 142 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TLE6Q9H808 572 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TUBA4BQ9H853 241 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 METTL7AQ9H8H3 244 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ANKZF1Q9H8Y5 726 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 AKIRIN1Q9H9L7 192 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PLGRKTQ9HBL7 147 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 EPB41L5Q9HCM4 733 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 FBXO6Q9NRD1 293 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 DDX28Q9NUL7 540 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SETD4Q9NVD3 440 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 GPATCH2LQ9NWQ4 482 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 OBP2AQ9NY56 170 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 HOXC10Q9NYD6 342 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CNOT2Q9NZN8 540 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CWC15Q9P013 229 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SEPT10Q9P0V9 454 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 VPS54Q9P1Q0 977 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 BCCIPQ9P287 314 aaKnown RBP eCLIP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ANKMY1Q9P2S6 941 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MYO1AQ9UBC5 1043 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PEMTQ9UBM1 199 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 POLKQ9UBT6 870 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MTRF1LQ9UGC7 380 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 SLC2A6Q9UGQ3 507 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TRMT6Q9UJA5 497 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 DBNLQ9UJU6 430 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 NENFQ9UMX5 172 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 C19orf53Q9UNZ5 99 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 EXOC7Q9UPT5 735 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 YARS2Q9Y2Z4 477 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 KLK5Q9Y337 293 aaPredicted RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MRPS16Q9Y3D3 137 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 NEUROG3Q9Y4Z2 214 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 LYVE1Q9Y5Y7 322 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 LRRFIP2Q9Y608 721 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 CLIC4Q9Y696 253 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MAU2Q9Y6X3 613 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 TDRD9Q8NDG6 1382 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 PDS5BQ9NTI5 1447 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 ADGRB3O60242 1522 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 MTCL1Q9Y4B5 1905 aaKnown RBP-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 DOCK9Q9BZ29 2069 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 VPS13DQ5THJ4 4388 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 F8P00451 2351 aa-0.5□□□□□ -2.49
TRAJ28-201ENST00000390509 AKAP13Q12802 2813 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ANK3Q12955 4377 aaKnown RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 IGHV5-51A0A0C4DH38 117 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 CENPVL3A0A0U1RRI6 287 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A1W2PNM2 257 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 A0A1W2PPC4 97 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ESYT2A0FGR8 921 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 OR2A25A4D2G3 310 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ERICH4A6NGS2 130 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 TUBAL3A6NHL2 446 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 DHRS7CA6NNS2 312 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 KNCNA6PVL3 124 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF724A8MTY0 619 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 A8MVM7 634 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 BTNL10A8MVZ5 291 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 MYO1GB0I1T2 1018 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 NEDD8-MDP1E9PL57 170 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 LMO7DNF2Z398 122 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 F8W8V4 182 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 G3V3Q6 166 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 C15orf65H3BRN8 121 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 CLDN34H7C241 214 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 TLR4O00206 839 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 MANBAO00462 879 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 UPK2O00526 184 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 AP3D1O14617 1153 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 SCAMP1O15126 338 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 NDUFS4O43181 175 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 DNPH1O43598 174 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 HCRTR1O43613 425 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 EFNA2O43921 213 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 LCMT2O60294 686 aaKnown RBP-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 OR10H3O60404 316 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 PLOD3O60568 738 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 HCN1O60741 890 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 CLUHO75153 1309 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 POLQO75417 2590 aa-0.51□□□□□ -2.49
TRAJ28-201ENST00000390509 ZNF254O75437 659 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms