RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 SLC5A4Q9NY91 659 aa-2.79□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CD274Q9NZQ7 290 aa-2.79□□□□□ -2.86
RNU6-1340P-201ENST00000384438 GLS2Q9UI32 602 aa-2.79□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CNOT7Q9UIV1 285 aaKnown RBP-2.79□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PCDHGB4Q9UN71 923 aa-2.79□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SLC7A11Q9UPY5 501 aa-2.79□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PCDHGB6Q9Y5F9 930 aa-2.79□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PCDHA1Q9Y5I3 950 aa-2.79□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TRBV23-1A0A0A0MS06 115 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 GLYATL1P3A0A0U1RQE8 302 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 LOC102723971A0A1B0GUV8 181 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 A8MVM7 634 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 KLRF2D3W0D1 207 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 H3BUI4 141 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 M0QZ24 198 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PSCAO43653 123 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SLC25A17O43808 307 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MBD4O95243 580 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 FKBP9O95302 570 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SLC2A10O95528 541 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 IGHV3-48P01763 117 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 LDHBP07195 334 aaKnown RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PRKAR1AP10644 381 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 P4HA1P13674 534 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 BLVRBP30043 206 aaPredicted RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 HTR2BP41595 481 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 RPL21P46778 160 aaKnown RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 NPBWR2P48146 333 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SH3BGRP55822 239 aaPredicted RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 FLIIQ13045 1269 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SNTB2Q13425 540 aaKnown RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TRPC3Q13507 836 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 GALEQ14376 348 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 GRB7Q14451 532 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 LAGE3Q14657 143 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MAD2L1BPQ15013 274 aaPredicted RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PKN2Q16513 984 aaKnown RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 FAM209AQ5JX71 171 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 HES3Q5TGS1 186 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 RINLQ6ZS11 566 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 ASRGL1Q7L266 308 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 RNF144BQ7Z419 303 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TPRA1Q86W33 373 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 RASSF3Q86WH2 238 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 LURAP1LQ8IV03 231 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CCDC71Q8IV32 467 aaPredicted RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CLECL1Q8IZS7 167 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SCAIQ8N9R8 606 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 INO80EQ8NBZ0 244 aaPredicted RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 IPMKQ8NFU5 416 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 OR2AP1Q8NGE2 309 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 OR9Q2Q8NGE9 314 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 OR5M9Q8NGP3 310 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 OR13C3Q8NGS6 347 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 LINC01560Q8TB33 94 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 C2CD4CQ8TF44 421 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TMEM170AQ8WVE7 144 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 DNAAF4Q8WXU2 420 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 NEIL2Q969S2 332 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MUL1Q969V5 352 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 WDR34Q96EX3 536 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 RBM18Q96H35 190 aaKnown RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 FAR2Q96K12 515 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SLC35G5Q96KT7 338 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CFAP44Q96MT7 982 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TSPAN32Q96QS1 320 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TTYH2Q9BSA4 534 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TMEM121Q9BTD3 319 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 INTS2Q9H0H0 1204 aaKnown RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 NARFLQ9H6Q4 476 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SP140LQ9H930 580 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SH3GLB2Q9NR46 395 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SETD4Q9NVD3 440 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 BCCIPQ9P287 314 aaKnown RBP eCLIP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SLC23A2Q9UGH3 650 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 DDX25Q9UHL0 483 aaKnown RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SMC3Q9UQE7 1217 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 NIP7Q9Y221 180 aaKnown RBP eCLIP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PAXBP1Q9Y5B6 917 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CLDN16Q9Y5I7 305 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MRPS18BQ9Y676 258 aaKnown RBP-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 SSH2Q76I76 1423 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 MIA3Q5JRA6 1907 aa-2.8□□□□□ -2.86
RNU6-1340P-201ENST00000384438 AK9Q5TCS8 1911 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 ADAMTSL3P82987 1691 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 FHOD3Q2V2M9 1422 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TRBV6-7A0A0A0MS04 114 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 A0A1W2PRB8 838 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 CTAGE15A4D2H0 777 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 PABPN1LA6NDY0 278 aaKnown RBP-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 ANKRD61A6NGH8 418 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 LRRC14BA6NHZ5 514 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 ZNF716A6NP11 495 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 HSPB2A8KAH6 182 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 BTNL10A8MVZ5 291 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 TMEM233B4DJY2 109 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 LOC730098B7Z3J9 87 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 BUB1O43683 1085 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 OR10H3O60404 316 aa-2.81□□□□□ -2.86
RNU6-1340P-201ENST00000384438 GCM2O75603 506 aaPredicted RBP-2.81□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms