RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 C16orf58Q96GQ5 468 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 PKNOX2Q96KN3 472 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 FAM111AQ96PZ2 611 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF559Q9BR84 538 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 PITHD1Q9GZP4 211 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ENKD1Q9H0I2 346 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 UBQLN3Q9H347 655 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 CENPHQ9H3R5 247 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 TUBB1Q9H4B7 451 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 MIEF1Q9NQG6 463 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 KLHL28Q9NXS3 571 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 TAS2R10Q9NYW0 307 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 SH3BP4Q9P0V3 963 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 BOKQ9UMX3 212 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 COL6A5A8TX70 2615 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 C1orf226A1L170 272 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 GOLGA6L10A6NI86 522 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 STX16-NPEPL1H3BU86 382 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 UPK1AO00322 258 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 STX16O14662 325 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 PEX11AO75192 247 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 TRIM3O75382 744 aaPredicted RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 ERN1O75460 977 aaKnown RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 CYC1P08574 325 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 IMPDH1P20839 514 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 GSTM2P28161 218 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 MSX1P28360 303 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 SUCLG1P53597 346 aaKnown RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 NRG3P56975 720 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 VSNL1P62760 191 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 RPS26P62854 115 aaKnown RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 SNTA1Q13424 505 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 IMPG1Q17R60 797 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 NDUFAF6Q330K2 333 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 ACSF3Q4G176 576 aaPredicted RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF385BQ569K4 471 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 CFAP157Q5JU67 520 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 CES4AQ5XG92 561 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 TIGD3Q6B0B8 471 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 LARP4Q71RC2 724 aaKnown RBP eCLIP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF550Q7Z398 422 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 DDIASQ8IXT1 998 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 TAGAPQ8N103 731 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 MNS1Q8NEH6 495 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 OR8K3Q8NH51 312 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 OR5AK3PQ8NH89 298 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 SARAFQ96BY9 339 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 MTBPQ96DY7 904 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 LCORQ96JN0 433 aaPredicted RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF597Q96LX8 424 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 BBS4Q96RK4 519 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 TUBA1CQ9BQE3 449 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 MCCC2Q9HCC0 563 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 LYARQ9NX58 379 aaKnown RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 GIN1Q9NXP7 522 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 SNX8Q9Y5X2 465 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 UGDHO60701 494 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 LYPLA1O75608 230 aaPredicted RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 IGKV1D-16P01601 117 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 IGHG3P01860 377 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 ATP1B1P05026 303 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 MYL2P10916 166 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 CSNK2A2P19784 350 aaPredicted RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 IL11P20809 199 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 ATP5F1P24539 256 aaPredicted RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 DNAJA1P31689 397 aaKnown RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 PRKAA2P54646 552 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 NME5P56597 212 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 CLDN15P56746 228 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 RPL38P63173 70 aaKnown RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF155Q12901 538 aaPredicted RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 LCP2Q13094 533 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 CBLBQ13191 982 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 TSC22D1Q15714 1073 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 SPRED3Q2MJR0 410 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 TSNAXIP1Q2TAA8 658 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF628Q5EBL2 1059 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 C1orf185Q5T7R7 199 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 LGSNQ5TDP6 509 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 RAET1LQ5VY80 246 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 MTFR2Q6P444 385 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 VWA1Q6PCB0 445 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 POMZP3Q6PJE2 187 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 PAOXQ6QHF9 649 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 SH2D5Q6ZV89 423 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 PAGE2Q7Z2X7 111 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 DMRTC2Q8IXT2 367 aaPredicted RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 FBXW8Q8N3Y1 598 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 KRTCAP2Q8N6L1 136 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 OR4C3Q8NH37 302 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 SPPL2AQ8TCT8 520 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 ABTB1Q969K4 478 aaPredicted RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 ISL2Q96A47 359 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF524Q96C55 264 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 RMND5BQ96G75 393 aaPredicted RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 WDYHV1Q96HA8 205 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 C3orf30Q96M34 536 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 POLDIP3Q9BY77 421 aaKnown RBP4.24□□□□□ -1.73
C9orf72-203ENST00000380003 GLIPR2Q9H4G4 154 aa4.24□□□□□ -1.73
C9orf72-203ENST00000380003 CLK4Q9HAZ1 481 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms