RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 DUSP21Q9H596 190 aa14.06□□□□□ -0.16
SNX2-201ENST00000379516 MTHFD2LQ9H903 347 aaPredicted RBP14.06□□□□□ -0.16
SNX2-201ENST00000379516 LIN28AQ9H9Z2 209 aaKnown RBP14.06□□□□□ -0.16
SNX2-201ENST00000379516 CACYBPQ9HB71 228 aaKnown RBP14.06□□□□□ -0.16
SNX2-201ENST00000379516 GPR55Q9Y2T6 319 aaPredicted RBP14.06□□□□□ -0.16
SNX2-201ENST00000379516 CCDC88CQ9P219 2028 aa14.06□□□□□ -0.16
SNX2-201ENST00000379516 SH3PXD2BA1X283 911 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 CDC123O75794 336 aaPredicted RBP14.05□□□□□ -0.16
SNX2-201ENST00000379516 SLITRK5O94991 958 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 CHMP24386 653 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 PRKAR1BP31321 381 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 GABRA4P48169 554 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 CRISP1P54107 249 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 EPHA4P54764 986 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 UGT2B15P54855 530 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 OR1D5P58170 312 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 MAT1AQ00266 395 aaKnown RBP14.05□□□□□ -0.16
SNX2-201ENST00000379516 TARDBPQ13148 414 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNX2-201ENST00000379516 TMEM236Q5W0B7 351 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 TYW3Q6IPR3 259 aaKnown RBP14.05□□□□□ -0.16
SNX2-201ENST00000379516 PGBD2Q6P3X8 592 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 DEPDC4Q8N2C3 294 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 CDRT4Q8N9R6 151 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 RHOXF1Q8NHV9 184 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 ARHGDIGQ99819 225 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 FUZQ9BT04 418 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 DGCR6LQ9BY27 220 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 IMPAD1Q9NX62 359 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 KLHL28Q9NXS3 571 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 IFT52Q9Y366 437 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 CHST2Q9Y4C5 530 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 TRMUO75648 421 aaKnown RBP14.05□□□□□ -0.16
SNX2-201ENST00000379516 NSA2O95478 260 aaKnown RBP14.05□□□□□ -0.16
SNX2-201ENST00000379516 PCMT1P22061 227 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 DCKP27707 260 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 CTSKP43235 329 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 AVPR1BP47901 424 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 TAS2R41P59536 307 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 STX4Q12846 297 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 FAM53BQ14153 422 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 ERV3-1Q14264 604 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 GPR68Q15743 365 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 SYT16Q17RD7 645 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 DHRS4L2Q6PKH6 230 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 DGAT2L6Q6ZPD8 337 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 PEX5LQ8IYB4 626 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 ALDH16A1Q8IZ83 802 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 CLIP4Q8N3C7 705 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 METTL27Q8N6F8 245 aaPredicted RBP14.05□□□□□ -0.16
SNX2-201ENST00000379516 PIK3R3Q92569 461 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 C12orf43Q96C57 262 aaKnown RBP14.05□□□□□ -0.16
SNX2-201ENST00000379516 MMABQ96EY8 250 aaPredicted RBP14.05□□□□□ -0.16
SNX2-201ENST00000379516 ZNF285Q96NJ3 590 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 SDF2Q99470 211 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 SPRTNQ9H040 489 aaPredicted RBP14.05□□□□□ -0.16
SNX2-201ENST00000379516 RAB33BQ9H082 229 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 EPHA6Q9UF33 1036 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 MUTYHQ9UIF7 546 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 ZNF232Q9UNY5 417 aa14.05□□□□□ -0.16
SNX2-201ENST00000379516 MRPS33Q9Y291 106 aaKnown RBP14.05□□□□□ -0.16
SNX2-201ENST00000379516 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 ZNF701M0R085 212 aaPredicted RBP14.04□□□□□ -0.16
SNX2-201ENST00000379516 SEC14L2O76054 403 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 OSMP13725 252 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 FNTBP49356 437 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 MAPK10P53779 464 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 SH3BGRP55822 239 aaPredicted RBP14.04□□□□□ -0.16
SNX2-201ENST00000379516 EMX1Q04741 257 aaPredicted RBP14.04□□□□□ -0.16
SNX2-201ENST00000379516 INAVAQ3KP66 663 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 DCST2Q5T1A1 773 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 GTF2IRD2BQ6EKJ0 949 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 NIPAL1Q6NVV3 410 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 ZCCHC12Q6PEW1 402 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 GTF2IRD2Q86UP8 949 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 CCDC103Q8IW40 242 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 VWA5B2Q8N398 1253 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 SLC25A45Q8N413 288 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 COX18Q8N8Q8 333 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 ZNF420Q8TAQ5 688 aaPredicted RBP14.04□□□□□ -0.16
SNX2-201ENST00000379516 GPR151Q8TDV0 419 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 CTHRC1Q96CG8 243 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 CNDP2Q96KP4 475 aaKnown RBP14.04□□□□□ -0.16
SNX2-201ENST00000379516 NAA50Q9GZZ1 169 aaKnown RBP14.04□□□□□ -0.16
SNX2-201ENST00000379516 CAPN10Q9HC96 672 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 MAN2C1Q9NTJ4 1040 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 ZNF226Q9NYT6 803 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 FTSJ1Q9UET6 329 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 ZNF443Q9Y2A4 671 aaPredicted RBP14.04□□□□□ -0.16
SNX2-201ENST00000379516 SPAG17Q6Q759 2223 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 TMEM131Q92545 1883 aa14.04□□□□□ -0.16
SNX2-201ENST00000379516 CLDN24A6NM45 220 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 CPSF4LA6NMK7 179 aaKnown RBP14.03□□□□□ -0.16
SNX2-201ENST00000379516 ZAR1LA6NP61 321 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 RGS10O43665 173 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 SOX14O95416 240 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 CCNYL3P0C7X3 344 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 ATXN8OSP0DMR3 200 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 SEPHS1P49903 392 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 CDC42P60953 191 aa14.03□□□□□ -0.16
SNX2-201ENST00000379516 CSNK2BP67870 215 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms