RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 OR6C70A6NIJ9 312 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 SLC28A2O43868 658 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 NKX2-2O95096 273 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 HMGN2P05204 90 aaKnown RBP12.19□□□□□ -0.46
CKAP2-202ENST00000378034 NCF2P19878 526 aaPredicted RBP12.19□□□□□ -0.46
CKAP2-202ENST00000378034 CNR1P21554 472 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 UQCRC2P22695 453 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 PNLIPRP2P54317 469 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 PSMD4P55036 377 aaKnown RBP12.19□□□□□ -0.46
CKAP2-202ENST00000378034 NNATQ16517 81 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 COLEC12Q5KU26 742 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 TBCELQ5QJ74 424 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 EXOSC6Q5RKV6 272 aaKnown RBP12.19□□□□□ -0.46
CKAP2-202ENST00000378034 TMEM81Q6P7N7 255 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 FAM180AQ6UWF9 173 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 ZNF605Q86T29 641 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 FBXW8Q8N3Y1 598 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 CISD2Q8N5K1 135 aaKnown RBP12.19□□□□□ -0.46
CKAP2-202ENST00000378034 TRIML2Q8N7C3 387 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 BCORP1Q8N888 145 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 FAM13CQ8NE31 585 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 SNRNP40Q96DI7 357 aaKnown RBP12.19□□□□□ -0.46
CKAP2-202ENST00000378034 SLC35A4Q96G79 324 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 STACQ99469 402 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 BARD1Q99728 777 aaKnown RBP12.19□□□□□ -0.46
CKAP2-202ENST00000378034 ACTRT3Q9BYD9 372 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 HES7Q9BYE0 225 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 TRIM4Q9C037 500 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 EQTNQ9NQ60 294 aa12.19□□□□□ -0.46
CKAP2-202ENST00000378034 CHCHD2Q9Y6H1 151 aaPredicted RBP12.19□□□□□ -0.46
CKAP2-202ENST00000378034 PEX1O43933 1283 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 CPSF4O95639 269 aaKnown RBP12.18□□□□□ -0.46
CKAP2-202ENST00000378034 ALOX5P09917 674 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 SOAT1P35610 550 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 KCNK10P57789 538 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 TP53BP2Q13625 1128 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 EFR3AQ14156 821 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 RCAN2Q14206 197 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 DECR1Q16698 335 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 CDC73Q6P1J9 531 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 BLOC1S3Q6QNY0 202 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 ANKRD46Q86W74 232 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 SULF2Q8IWU5 870 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 PRR22Q8IZ63 422 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 OR10G3Q8NGC4 313 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 OR9I1Q8NGQ6 314 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 SPPL2AQ8TCT8 520 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 TMBIM1Q969X1 311 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 ITCHQ96J02 903 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 COL21A1Q96P44 957 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 PANX1Q96RD7 426 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 FAM173AQ9BQD7 235 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 ZNF385DQ9H6B1 395 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 DUSP22Q9NRW4 184 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 GPATCH2Q9NW75 528 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 CBLCQ9ULV8 474 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 FAF1Q9UNN5 650 aaPredicted RBP12.18□□□□□ -0.46
CKAP2-202ENST00000378034 PCDHGB3Q9Y5G1 929 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 C9JVG2 144 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 TSPAN2O60636 221 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 NME6O75414 186 aaPredicted RBP12.18□□□□□ -0.46
CKAP2-202ENST00000378034 REM1O75628 298 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 KCNH1O95259 989 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 CCL3P10147 92 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 IL12BP29460 328 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 LSP1P33241 339 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 GABRA3P34903 492 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 PIGAP37287 484 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 MLLT10P55197 1068 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 FBXW4P57775 412 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 TLE1Q04724 770 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 GAB1Q13480 694 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 GK5Q6ZS86 529 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 C6orf120Q7Z4R8 191 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 MTERF4Q7Z6M4 381 aaKnown RBP12.18□□□□□ -0.46
CKAP2-202ENST00000378034 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.18□□□□□ -0.46
CKAP2-202ENST00000378034 CPSF7Q8N684 471 aaKnown RBP12.18□□□□□ -0.46
CKAP2-202ENST00000378034 GPR151Q8TDV0 419 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 GRHL3Q8TE85 626 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 SLC9A6Q92581 669 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 DIO2Q92813 273 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 HGDQ93099 445 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 TMCO6Q96DC7 493 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 TAAR6Q96RI8 345 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 NSRP1Q9H0G5 558 aaKnown RBP12.18□□□□□ -0.46
CKAP2-202ENST00000378034 PIGUQ9H490 435 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 FAM53CQ9NYF3 392 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 CNOT11Q9UKZ1 510 aaKnown RBP12.18□□□□□ -0.46
CKAP2-202ENST00000378034 VPS4AQ9UN37 437 aa12.18□□□□□ -0.46
CKAP2-202ENST00000378034 RNF103-CHMP3A0A140T963 221 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 DUXAA6NLW8 204 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 ZCCHC18P0CG32 403 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 ACP2P11117 423 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 LCN1P31025 176 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 TRPC1P48995 793 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 MEOX1P50221 254 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 TXNL4AP83876 142 aaKnown RBP12.17□□□□□ -0.46
CKAP2-202ENST00000378034 SNTA1Q13424 505 aa12.17□□□□□ -0.46
CKAP2-202ENST00000378034 LASP1Q14847 261 aaKnown RBP12.17□□□□□ -0.46
CKAP2-202ENST00000378034 TIGD2Q4W5G0 525 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms