RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ARSBP15848 533 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 OR3A3P47888 321 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 STK19P49842 368 aaPredicted RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 KCNJ10P78508 379 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 GLT8D1Q68CQ7 371 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 HBMQ6B0K9 141 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 CCDC116Q8IYX3 515 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 LRRC25Q8N386 305 aaPredicted RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 OR2T35Q8NGX2 323 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 LKAAEAR1Q8TD35 194 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 ZC3H10Q96K80 434 aaKnown RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF582Q96NG8 517 aaPredicted RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 NDUFB11Q9NX14 153 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 SLC25A37Q9NYZ2 338 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TRDV1A0A1B0GX56 115 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 ICMTO60725 284 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 SRCP12931 536 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 NUDT1P36639 197 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 RPS25P62851 125 aaKnown RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 PUM1Q14671 1186 aaKnown RBP eCLIP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 UBE2NLQ5JXB2 153 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 PLBD1Q6P4A8 553 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 PSRC1Q6PGN9 363 aaPredicted RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 SHFQ7M4L6 423 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 REM2Q8IYK8 340 aaPredicted RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 CPXM2Q8N436 756 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 WDR48Q8TAF3 677 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 RAB7BQ96AH8 199 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 AHCYL2Q96HN2 611 aaKnown RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 IGSF21Q96ID5 467 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 EGLN2Q96KS0 407 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 DHRS1Q96LJ7 313 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 ARHGAP39Q9C0H5 1083 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 ISYNA1Q9NPH2 558 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 SLC39A1Q9NY26 324 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 LAMP5Q9UJQ1 280 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 PLEKHA6Q9Y2H5 1048 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TBC1D3DA0A087WVF3 549 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TBC1D3IA0A087WXS9 549 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TBC1D3EA0A087X179 549 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TBC1D3KA0A087X1G2 549 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TRBV4-1A0A0J9YWV2 114 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TBC1D3FA6NER0 549 aaPredicted RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TBC1D3LB9A6J9 549 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 H7BY64 318 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 M0R3H8 397 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 SC5DO75845 299 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 RPP14O95059 124 aaKnown RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TGM6O95932 706 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 NUDT7P0C024 238 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TBC1D3HP0C7X1 549 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 PYCR1P32322 319 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 SELENBP1Q13228 472 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 KLHL26Q53HC5 615 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TBC1D3GQ6DHY5 549 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TBC1D3CQ6IPX1 549 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 DNM1P34Q6PK57 102 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TBC1D3Q8IZP1 549 aaPredicted RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 SLAIN1Q8ND83 568 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 NLGN2Q8NFZ4 835 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 CNOT9Q92600 299 aaKnown RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 PRAP1Q96NZ9 151 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 GPER1Q99527 375 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 KCNK12Q9HB15 430 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 F5H5P2 479 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TMX2-CTNND1H3BSU7 103 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 TACR1P25103 407 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 ACVR1BP36896 505 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 MAN2A2P49641 1150 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 HBA1P69905 142 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 PIN1Q13526 163 aaPredicted RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 POU4F3Q15319 338 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 DUSP6Q16828 381 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 AMZ1Q400G9 498 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 SCGB2B2Q4G0G5 96 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 CATSPEREQ5SY80 951 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 C3P1Q6ZMU1 363 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 RBM23Q86U06 439 aaKnown RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 PDZD3Q86UT5 571 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 NRMQ8IXM6 262 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 RNASE11Q8TAA1 199 aaKnown RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 ADAMTS14Q8WXS8 1223 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 ING5Q8WYH8 240 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 NEIL2Q969S2 332 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 HSPA12BQ96MM6 686 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 RTP3Q9BQQ7 232 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 ZNF471Q9BX82 626 aaPredicted RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 FKBP14Q9NWM8 211 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 HPF1Q9NWY4 346 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 ATPIF1Q9UII2 106 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 GJD2Q9UKL4 321 aa8.3□□□□□ -1.08
PCDH9-202ENST00000377865 GREB1LQ9C091 1923 aaPredicted RBP8.3□□□□□ -1.08
PCDH9-202ENST00000377865 LRRC37AA6NMS7 1700 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 ASPDHA6ND91 283 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 GNALP38405 381 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 CAPZA1P52907 286 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 PGGHGQ32M88 737 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 FAM76BQ5HYJ3 339 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 CLLU1OSQ5K130 101 aa8.29□□□□□ -1.08
PCDH9-202ENST00000377865 SLC16A12Q6ZSM3 486 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms