RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 RAB14P61106 215 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 WDR5P61964 334 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 MPEG1Q2M385 716 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF542PQ5EBM4 170 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HENMT1Q5T8I9 393 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PRPF38BQ5VTL8 546 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 KIAA1324Q6UXG2 1013 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 UNC5DQ6UXZ4 953 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NOXA1Q86UR1 476 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ADIPOR2Q86V24 386 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OR52I1Q8NGK6 324 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF354BQ96LW1 612 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CTRCQ99895 268 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 LGR4Q9BXB1 951 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PLA2G12AQ9BZM1 189 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CLEC4MQ9H2X3 399 aaPredicted RBP13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 LCMT2O60294 686 aaKnown RBP13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 DHFRP00374 187 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SSTR2P30874 369 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CD79BP40259 229 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ACTR1BP42025 376 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CRYBA2P53672 197 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ACTR1AP61163 376 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GATSQ8NAP1 163 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 LILRB4Q8NHJ6 448 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SUN5Q8TC36 379 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 RFKQ969G6 155 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 DTD2Q96FN9 168 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PITX2Q99697 317 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GABARAPL3Q9BY60 117 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GABARAPL1Q9H0R8 117 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CDCP1Q9H5V8 836 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 MYNNQ9NPC7 610 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 BRD7Q9NPI1 651 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF224Q9NZL3 707 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 KLK4Q9Y5K2 254 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 XIRP2A4UGR9 3374 aa13.56□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SLC5A10A0PJK1 596 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ANKRD34BA5PLL1 514 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 I3L521 148 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 MID1O15344 667 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FKTNO75072 461 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ARHGEF15O94989 841 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NUDT14O95848 222 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 HPGDP15428 266 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ST3GAL3Q11203 375 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CDKL4Q5MAI5 379 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PPP2R2DQ66LE6 453 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 LHX8Q68G74 356 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PRR23CQ6ZRP0 262 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CEACAM19Q7Z692 300 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TECPR1Q7Z6L1 1165 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 COX18Q8N8Q8 333 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 BBS1Q8NFJ9 593 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SNX33Q8WV41 574 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 DEDD2Q8WXF8 326 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 TM4SF18Q96CE8 201 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CPEB1Q9BZB8 566 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GLIPR2Q9H4G4 154 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NUDT15Q9NV35 164 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 DNMT3BQ9UBC3 853 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NDRG2Q9UN36 371 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CA5BQ9Y2D0 317 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 C1orf226A1L170 272 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SCG5P05408 212 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 UQCRC1P31930 480 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FLYWCH1Q4VC44 716 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SYT14P1Q58G82 188 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SFRP4Q6FHJ7 346 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CNKSR3Q6P9H4 555 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PEX5LQ8IYB4 626 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ARRDC3Q96B67 414 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 MCCC1Q96RQ3 725 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PHPT1Q9NRX4 125 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 THSD1Q9NS62 852 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GRXCR1A8MXD5 290 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FFAR1O14842 300 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 LYRM1O43325 122 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PROM1O43490 865 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SEMA3DO95025 777 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SOX2P48431 317 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZMYND11Q15326 602 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CDKN3Q16667 212 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 OR4C11Q6IEV9 310 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 METTL2BQ6P1Q9 378 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 LINGO2Q7L985 606 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ZNF438Q7Z4V0 828 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 NKAIN4Q8IVV8 208 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 PRSS58Q8IYP2 241 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ELMOD2Q8IZ81 293 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 VWA5B2Q8N398 1253 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 SLAIN1Q8ND83 568 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 GPR32P1Q8NGA4 272 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CCDC32Q9BV29 185 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 FBXL12Q9NXK8 326 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CCDC59Q9P031 241 aaKnown RBP13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ING4Q9UNL4 249 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 ATG4BQ9Y4P1 393 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 KCNE3Q9Y6H6 103 aa13.55□□□□□ -0.24
TNFRSF1B-201ENST00000376259 CASP8AP2Q9UKL3 1982 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms