RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 TMPRSS11BQ86T26 416 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 VRK3Q8IV63 474 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 ETFBKMTQ8IXQ9 262 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 OR13F1Q8NGS4 319 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 OR10J5Q8NHC4 309 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 TRUB1Q8WWH5 349 aaKnown RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 ADAD1Q96M93 576 aaKnown RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 COL21A1Q96P44 957 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 RTP3Q9BQQ7 232 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CENPOQ9BU64 300 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 B3GNT5Q9BYG0 378 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 POLD4Q9HCU8 107 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 DERAQ9Y315 318 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 PLLPQ9Y342 182 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 YIPF1Q9Y548 306 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 KIF26BQ2KJY2 2108 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 MSTNO14793 375 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 PDGFBP01127 241 aaPredicted RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 M6PRP20645 277 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 DDCP20711 480 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 MMP8P22894 467 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 PKLRP30613 574 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CRHR2Q13324 411 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 JOSD1Q15040 202 aaPredicted RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 DUSP7Q16829 419 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 FLYWCH1Q4VC44 716 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 LAIR1Q6GTX8 287 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CHSY3Q70JA7 882 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 MARCH9Q86YJ5 346 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CLEC10AQ8IUN9 316 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 OR4A16Q8NH70 328 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 ZNF384Q8TF68 577 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 PCBD2Q9H0N5 130 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 RAB1BQ9H0U4 201 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 RHBGQ9H310 441 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 KLF15Q9UIH9 416 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 KCNG2Q9UJ96 466 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CCL15-CCL14A0A0B4J2E2 113 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 E7EWF7 191 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 FAM86B1E9PN63 330 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 H3BQF6 201 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CCSO14618 274 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 TGM5O43548 720 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CBSLP0DN79 551 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 AHCYP23526 432 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 FCARP24071 287 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 SLC7A1P30825 629 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CBSP35520 551 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 GALCP54803 685 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 GRM4Q14833 912 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 TWIST1Q15672 202 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 NKPD1Q17RQ9 610 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 BCL2L15Q5TBC7 163 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 OR2T2Q6IF00 324 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 ADAM5Q6NVV9 412 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 OGFOD3Q6PK18 319 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 OR51L1Q8NGJ5 315 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 RBM14Q96PK6 669 aaKnown RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CIB3Q96Q77 187 aaPredicted RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 P2RX7Q99572 595 aaKnown RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 COPS8Q99627 209 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 RAVER2Q9HCJ3 691 aaKnown RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 ENPP5Q9UJA9 477 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 POGZQ7Z3K3 1410 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 ERVV-2B6SEH9 535 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 M0R3E3 92 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 C6orf47O95873 294 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CATP04040 527 aaKnown RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 HLA-DQB2P05538 268 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 NFYAP23511 347 aaPredicted RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 OXTRP30559 389 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 RBM11P57052 281 aaKnown RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 SSX1Q16384 188 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CATSPEREQ5SY80 951 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 LYPLAL1Q5VWZ2 237 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 FDX2Q6P4F2 183 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 TECPR1Q7Z6L1 1165 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 VASH2Q86V25 355 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 OSTF1Q92882 214 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 MRPL57Q9BQC6 102 aaKnown RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CORO1BQ9BR76 489 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 OSBPL2Q9H1P3 480 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 MVB12BQ9H7P6 319 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 B3GNT3Q9Y2A9 372 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 POLDIP2Q9Y2S7 368 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 TGIF2-C20orf24A0A0A6YYL0 155 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 ACKR2O00590 384 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CPNE6O95741 557 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 NAT2P11245 290 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 GLB1P16278 677 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 CNR1P21554 472 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 PTH2RP49190 550 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 SNRPD2P62316 118 aaKnown RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 KCNAB2Q13303 367 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 COL19A1Q14993 1142 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 SMTNL2Q2TAL5 461 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 SPATA31D4Q6ZUB0 917 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 MAP4K3Q8IVH8 894 aa5.69□□□□□ -1.5
SCN2A-202ENST00000375427 BOLLQ8N9W6 283 aaKnown RBP5.69□□□□□ -1.5
SCN2A-202ENST00000375427 SLC43A3Q8NBI5 491 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms