RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 RALYQ9UKM9 306 aaKnown RBP6.31□□□□□ -1.4
UBR4-204ENST00000375254 GRIN2AQ12879 1464 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 TCOF1Q13428 1488 aaKnown RBP6.31□□□□□ -1.4
UBR4-204ENST00000375254 B2MP61769 119 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 RPL24P83731 157 aaKnown RBP6.31□□□□□ -1.4
UBR4-204ENST00000375254 FRMD1Q8N878 549 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 OR6K6Q8NGW6 343 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 SLC35A5Q9BS91 424 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.31□□□□□ -1.42e-6■■□□□ 14.2
UBR4-204ENST00000375254 IL25Q9H293 177 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 ZNF609O15014 1411 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 ROBO3Q96MS0 1386 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 E5RGE8 158 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 APOA2P02652 100 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 GPR33Q49SQ1 333 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 CLEC12AQ5QGZ9 265 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 SHFQ7M4L6 423 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 EEF1E1-BLOC1S5C9J1V9 151 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 TMEM62Q0P6H9 643 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 TMEM43Q9BTV4 400 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 ZNF341Q9BYN7 854 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 SLC2A11Q9BYW1 496 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 SLC6A20Q9NP91 592 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 ACOXLQ9NUZ1 547 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 PCDHGA2Q9Y5H1 932 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 SLC22A20A6NK97 555 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 ENTPD3O75355 529 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 RAD51DO75771 328 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 PIAS1O75925 651 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 POLR2HP52434 150 aaKnown RBP6.31□□□□□ -1.4
UBR4-204ENST00000375254 TAS2R40P59535 323 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 SEZ6L2Q6UXD5 910 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 TRILQ7L0X0 811 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 FFAR2O15552 330 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 DPM1O60762 260 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 NKX3-2P78367 333 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 FNDC3BQ53EP0 1204 aaKnown RBP6.31□□□□□ -1.4
UBR4-204ENST00000375254 BTNL8Q6UX41 500 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 SLC46A3Q7Z3Q1 461 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 IL17RDQ8NFM7 739 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 EDEM1Q92611 657 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 NTPCRQ9BSD7 190 aaKnown RBP6.31□□□□□ -1.4
UBR4-204ENST00000375254 PIN4Q9Y237 131 aaKnown RBP6.31□□□□□ -1.4
UBR4-204ENST00000375254 TNFSF13BQ9Y275 285 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 UBE2J1Q9Y385 318 aaPredicted RBP6.31□□□□□ -1.4
UBR4-204ENST00000375254 PCDHB14Q9Y5E9 798 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 NLRP1Q9C000 1473 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 COL15A1P39059 1388 aa6.31□□□□□ -1.4
UBR4-204ENST00000375254 ICAM1P05362 532 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 MMP3P08254 477 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 RRASP10301 218 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ZNF25P17030 456 aaPredicted RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 ZNF154Q13106 437 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 CCINQ13939 588 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 DNERQ8NFT8 737 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 GPX8Q8TED1 209 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ZNF566Q969W8 418 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SGIP1Q9BQI5 828 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 C7orf72A4D263 438 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SLC25A14O95258 325 aaPredicted RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 FGF3P11487 239 aaPredicted RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 SFTPCP11686 197 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 GM2AP17900 193 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 CLDN8P56748 225 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 TMEM173Q86WV6 379 aaPredicted RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 NTAN1Q96AB6 310 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SHARPINQ9H0F6 387 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ZBTB20Q9HC78 741 aaPredicted RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 COLEC10Q9Y6Z7 277 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 WASH3PC4AMC7 463 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 HHLA1C9JL84 531 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 KCNJ13O60928 360 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 NSG1P42857 185 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 MTNR1BP49286 362 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 HSD11B2P80365 405 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 MSS51Q4VC12 460 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 PRSS58Q8IYP2 241 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 DEFB106AQ8N104 65 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 NHLRC2Q8NBF2 726 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SLC22A7Q9Y694 548 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SPATA31C2B4DYI2 1134 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SLC31A2O15432 143 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 CXCR3P49682 368 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 PSMB3P49720 205 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SP140Q13342 867 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 DPYSL2Q16555 572 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 TOR2AQ5JU69 321 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 SLC18B1Q6NT16 456 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 OR10D4PQ8NGN7 298 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ZNF514Q96K75 400 aaPredicted RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 NICN1Q9BSH3 213 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 LDAHQ9H6V9 325 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ZDHHC8Q9ULC8 765 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 GLTPD2A6NH11 291 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 PTBP3O95758 552 aaKnown RBP6.3□□□□□ -1.4
UBR4-204ENST00000375254 F2RL1P55085 397 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 INAVAQ3KP66 663 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 ANKRD16Q6P6B7 361 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 PRR22Q8IZ63 422 aa6.3□□□□□ -1.4
UBR4-204ENST00000375254 LRRC52Q8N7C0 313 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms