RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 MAFAQ8NHW3 353 aaPredicted RBP4.53□□□□□ -1.68
USP48-202ENST00000374730 FBXO30Q8TB52 745 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 SKA2Q8WVK7 121 aaPredicted RBP4.53□□□□□ -1.68
USP48-202ENST00000374730 IPCEF1Q8WWN9 437 aaPredicted RBP4.53□□□□□ -1.68
USP48-202ENST00000374730 GLYATL1Q969I3 302 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 NCLNQ969V3 563 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 TMEM159Q96B96 161 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 TMIGD2Q96BF3 282 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 ISOC1Q96CN7 298 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 CXorf40BQ96DE9 158 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 WDR34Q96EX3 536 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 C11orf24Q96F05 449 aaPredicted RBP4.53□□□□□ -1.68
USP48-202ENST00000374730 NRBF2Q96F24 287 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 DTD2Q96FN9 168 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 PYURFQ96I23 114 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 APOLD1Q96LR9 279 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 TSSK3Q96PN8 268 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 DOK1Q99704 481 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 CCM2Q9BSQ5 444 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 INPP5KQ9BT40 448 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 RIOK2Q9BVS4 552 aaKnown RBP4.53□□□□□ -1.68
USP48-202ENST00000374730 NPLQ9BXD5 320 aaPredicted RBP4.53□□□□□ -1.68
USP48-202ENST00000374730 ABCG8Q9H221 673 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 CHST8Q9H2A9 424 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 HPS4Q9NQG7 708 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 STOX2Q9P2F5 926 aaPredicted RBP4.53□□□□□ -1.68
USP48-202ENST00000374730 VPS29Q9UBQ0 182 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 DKK4Q9UBT3 224 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 LPAR3Q9UBY5 353 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 IL36AQ9UHA7 158 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 CD84Q9UIB8 345 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 BTNL2Q9UIR0 455 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 C3orf18Q9UK00 162 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 BLOC1S6Q9UL45 172 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 SAMD4AQ9UPU9 718 aaKnown RBP4.53□□□□□ -1.68
USP48-202ENST00000374730 SLC22A14Q9Y267 594 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 SLC27A6Q9Y2P4 619 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 V9GYQ6 96 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 CHD9Q3L8U1 2897 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 CKAP5Q14008 2032 aa4.53□□□□□ -1.68
USP48-202ENST00000374730 KIAA0100Q14667 2235 aaKnown RBP4.53□□□□□ -1.68
USP48-202ENST00000374730 MKI67P46013 3256 aaKnown RBP4.52□□□□□ -1.69
USP48-202ENST00000374730 CLCA1A8K7I4 914 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 HIDE1A8MVS5 230 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 MAGEB17A8MXT2 336 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 TTC34A8MYJ7 566 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 E7EQ34 232 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 ZNF197O14709 1029 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 FPGTO14772 594 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 CLGNO14967 610 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 NPC1O15118 1278 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 SCAMP2O15127 329 aaKnown RBP4.52□□□□□ -1.69
USP48-202ENST00000374730 MTX2O75431 263 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 RFPL2O75678 378 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 SEC14L2O76054 403 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 EPN2O95208 641 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 CLIC3O95833 236 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 SERPINA1P01009 418 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 ABCB1P08183 1280 aaPredicted RBP4.52□□□□□ -1.69
USP48-202ENST00000374730 CISD3P0C7P0 127 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 PCNAP12004 261 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 CEBPBP17676 345 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 IMPA1P29218 277 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 TIA1P31483 386 aaKnown RBP eCLIP4.52□□□□□ -1.69
USP48-202ENST00000374730 CTNNB1P35222 781 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 THBS4P35443 961 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 HPCAL1P37235 193 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 DCTP40126 519 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 CTSCP53634 463 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 RAD23AP54725 363 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 NUP107P57740 925 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 PLIN5Q00G26 463 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 ACSM2AQ08AH3 577 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 ELP6Q0PNE2 266 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 TMEM115Q12893 351 aaPredicted RBP4.52□□□□□ -1.69
USP48-202ENST00000374730 SLC14A1Q13336 389 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 PPIGQ13427 754 aaKnown RBP eCLIP4.52□□□□□ -1.691e-6■■□□□ 12.2
USP48-202ENST00000374730 VEZF1Q14119 521 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 DOC2AQ14183 400 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 CLCA4Q14CN2 919 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 SPIN4Q56A73 249 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 XKR6Q5GH73 641 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 OTUD3Q5T2D3 398 aaPredicted RBP4.52□□□□□ -1.69
USP48-202ENST00000374730 C10orf25Q5T742 122 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 ANXA8L1Q5VT79 327 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 PLPP4Q5VZY2 271 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 ACSM2BQ68CK6 577 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 AWAT2Q6E213 333 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 OR4F3Q6IEY1 312 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 CES5AQ6NT32 575 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 DEF8Q6ZN54 512 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 GCNT7Q6ZNI0 430 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 KCTD8Q6ZWB6 473 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 PIWIL3Q7Z3Z3 882 aaKnown RBP4.52□□□□□ -1.69
USP48-202ENST00000374730 LRRTM4Q86VH4 590 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 CLVS1Q8IUQ0 354 aaPredicted RBP4.52□□□□□ -1.69
USP48-202ENST00000374730 LIX1LQ8IVB5 337 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 C8orf59Q8N0T1 100 aaPredicted RBP4.52□□□□□ -1.69
USP48-202ENST00000374730 C10orf111Q8N326 155 aa4.52□□□□□ -1.69
USP48-202ENST00000374730 NANOGP1Q8N7R0 232 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms