RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 OR6C4Q8NGE1 309 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 DOK4Q8TEW6 326 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 FNDC11Q9BVV2 318 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 MTHFD2LQ9H903 347 aaPredicted RBP23.34■■□□□ 1.33
CTSA-203ENST00000372459 CACYBPQ9HB71 228 aaKnown RBP23.34■■□□□ 1.33
CTSA-203ENST00000372459 SCN3BQ9NY72 215 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 TPRKBQ9Y3C4 175 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 OR10H2O60403 315 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 FCMRO60667 390 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 ADAP00813 363 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 JUNBP17275 347 aaPredicted RBP23.34■■□□□ 1.33
CTSA-203ENST00000372459 FMO3P31513 532 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 CTSKP43235 329 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 OR1D5P58170 312 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 MGAT2Q10469 447 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 NEDD8Q15843 81 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 EXOSC6Q5RKV6 272 aaKnown RBP23.34■■□□□ 1.33
CTSA-203ENST00000372459 LYSMD4Q5XG99 296 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 VRK2Q86Y07 508 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 OR52P1PQ8NH57 321 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 CTHRC1Q96CG8 243 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 ZG16BQ96DA0 208 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 PRRC1Q96M27 445 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 MGAT4BQ9UQ53 548 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 IFT52Q9Y366 437 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 WDR45Q9Y484 360 aa23.34■■□□□ 1.33
CTSA-203ENST00000372459 A0A1W2PRQ8 180 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 PTGES3LE9PB15 166 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 H3BMQ9 156 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 ZIC2O95409 532 aaPredicted RBP23.33■■□□□ 1.33
CTSA-203ENST00000372459 AVPR1BP47901 424 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 FNTBP49356 437 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 DGCR6Q14129 220 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 INAVAQ3KP66 663 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 Q6ZPB1 254 aaPredicted RBP23.33■■□□□ 1.33
CTSA-203ENST00000372459 ENTHD1Q8IYW4 607 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 SPARTQ8N0X7 666 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 CARFQ8N187 725 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 PEX11GQ96HA9 241 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 COG8Q96MW5 612 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 STACQ99469 402 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 ARHGDIGQ99819 225 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 RBCK1Q9BYM8 510 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 DUSP22Q9NRW4 184 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 KLHL28Q9NXS3 571 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 MKLN1Q9UL63 735 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 SNX5Q9Y5X3 404 aa23.33■■□□□ 1.33
CTSA-203ENST00000372459 USP34Q70CQ2 3546 aa23.33■■□□□ 1.32
CTSA-203ENST00000372459 IGHV1OR21-1A0A087WYE8 117 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 XPNPEP2O43895 674 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 OR10H3O60404 316 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 CT62P0C5K7 136 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 GLB1P16278 677 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 ARRB1P49407 418 aaPredicted RBP23.32■■□□□ 1.32
CTSA-203ENST00000372459 SLC13A2Q13183 592 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 SEC23BQ15437 767 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 KLHL17Q6TDP4 642 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 SLC35F3Q8IY50 421 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 ZNF595Q8IYB9 648 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 SGCDQ92629 289 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 ELF4Q99607 663 aaPredicted RBP23.32■■□□□ 1.32
CTSA-203ENST00000372459 RASSF1Q9NS23 344 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 FITM1A5D6W6 292 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 DUX1O43812 170 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 PCDHGA12O60330 932 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 GNSP15586 552 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 TYW3Q6IPR3 259 aaKnown RBP23.32■■□□□ 1.32
CTSA-203ENST00000372459 PEX5LQ8IYB4 626 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 MAFAQ8NHW3 353 aaPredicted RBP23.32■■□□□ 1.32
CTSA-203ENST00000372459 NR4A3Q92570 626 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 MMABQ96EY8 250 aaPredicted RBP23.32■■□□□ 1.32
CTSA-203ENST00000372459 NODALQ96S42 347 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 SDF2Q99470 211 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 FUZQ9BT04 418 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 FANCEQ9HB96 536 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 PLGRKTQ9HBL7 147 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 AASSQ9UDR5 926 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 SATB2Q9UPW6 733 aa23.32■■□□□ 1.32
CTSA-203ENST00000372459 CLDN4O14493 209 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 CTNSO60931 367 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 HTR1AP08908 422 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 GPR3P46089 330 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 DHPSP49366 369 aaPredicted RBP23.31■■□□□ 1.32
CTSA-203ENST00000372459 STX4Q12846 297 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 GRM7Q14831 915 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 EXOSC7Q15024 291 aaKnown RBP23.31■■□□□ 1.32
CTSA-203ENST00000372459 NPTX1Q15818 432 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 PLXDC1Q8IUK5 500 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 DEPDC4Q8N2C3 294 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 VWA5B2Q8N398 1253 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 OR13F1Q8NGS4 319 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 SLC7A13Q8TCU3 470 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 PAK1IP1Q9NWT1 392 aaPredicted RBP23.31■■□□□ 1.32
CTSA-203ENST00000372459 ZNF232Q9UNY5 417 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 RNF6Q9Y252 685 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 SH3PXD2BA1X283 911 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 COQ9O75208 318 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 ATE1O95260 518 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 GSSP48637 474 aa23.31■■□□□ 1.32
CTSA-203ENST00000372459 MAT1AQ00266 395 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms