RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 STC2O76061 302 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 CEBPBP17676 345 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 BDKRB1P46663 353 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 HNRNPA3P51991 378 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 DPY19L1Q2PZI1 675 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 FAM174BQ3ZCQ3 159 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 GPAT4Q86UL3 456 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 MOCOSQ96EN8 888 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 LRIG1Q96JA1 1093 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 TSPAN10Q9H1Z9 355 aaPredicted RBP13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 HRH4Q9H3N8 390 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 LIN7CQ9NUP9 197 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 PCDHGA7Q9Y5G6 932 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 TRAV20A0A0B4J274 112 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 MEIS3P2A8K0S8 358 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 NDUFS4O43181 175 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 KIAA0513O60268 411 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 SLC6A9P48067 706 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 CRISP3P54108 245 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 RSU1Q15404 277 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 C14orf80Q86SX3 495 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 DGAT2Q96PD7 388 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 ZBTB26Q9HCK0 441 aa13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 ZFR2Q9UPR6 939 aaKnown RBP13.39□□□□□ -0.27
RAPGEF1-202ENST00000372190 PTGESO14684 152 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 PITHD1Q9GZP4 211 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 VRTNQ9H8Y1 702 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 A0A1W2PQU0 124 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 ARGFXA6NJG6 315 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 H1F0P07305 194 aaKnown RBP13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 RBMS1P29558 406 aaKnown RBP13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 UGT3A2Q3SY77 523 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 SFRP4Q6FHJ7 346 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 DPY19L2P1Q6NXN4 242 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 TMEM200AQ86VY9 491 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 FANK1Q8TC84 345 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 FAM122AQ96E09 287 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 DAZAP1Q96EP5 407 aaKnown RBP13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 TMPRSS5Q9H3S3 457 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 NAP1L6A6NFF2 107 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 DNAJB6O75190 326 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 NRLP54845 237 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 ACTBP60709 375 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 ACTG1P63261 375 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 TCEAL8Q8IYN2 117 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 TDHQ8IZJ6 230 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 TFGQ92734 400 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 MR1Q95460 341 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 DUSP22Q9NRW4 184 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 C19orf25Q9UFG5 118 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 TAC3Q9UHF0 121 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 ITGB4P16144 1822 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 FAM170BA6NMN3 283 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 ENSAO43768 121 aaKnown RBP13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 DIRAS3O95661 229 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 CD3GP09693 182 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 DPP6P42658 865 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 RPS14P62263 151 aaKnown RBP13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 KLF1Q13351 362 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 PET117Q6UWS5 81 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 PITPNBP48739 271 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 TAS2R30P59541 319 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 CST6Q15828 149 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 HIST2H3AQ71DI3 136 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 RABEPKQ7Z6M1 372 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 SMPDL3BQ92485 455 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 OR51J1Q9H342 316 aa13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 ZNF701Q9NV72 531 aaPredicted RBP13.38□□□□□ -0.27
RAPGEF1-202ENST00000372190 KLF11O14901 512 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 UGT2B7P16662 529 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 GMPRP36959 345 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 PAFAH1B3Q15102 231 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 RSC1A1Q92681 617 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 OR52A5Q9H2C5 316 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 MCCC2Q9HCC0 563 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 APMAPQ9HDC9 416 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 GCM1Q9NP62 436 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 EBF1Q9UH73 591 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 HCN4Q9Y3Q4 1203 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 VIRMAQ69YN4 1812 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 TLX2O43763 284 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 F10P00742 488 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 ELAVL3Q14576 367 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 SLC17A1Q14916 467 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 ZNF585AQ6P3V2 769 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 SLC29A4Q7RTT9 530 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 GPRIN1Q7Z2K8 1008 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 ST8SIA2Q92186 375 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 RBPMSQ93062 196 aaKnown RBP13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 SYT3Q9BQG1 590 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 KCNK13Q9HB14 408 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 PDLIM7Q9NR12 457 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 SLC2A9Q9NRM0 540 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 RXFP3Q9NSD7 469 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 TMEM59LQ9UK28 342 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 SOCS5O75159 536 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 ADAMTS4O75173 837 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 NIPSNAP2O75323 286 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 SEMA4FO95754 770 aa13.37□□□□□ -0.27
RAPGEF1-202ENST00000372190 HRGP04196 525 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms