RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 RPP38P78345 283 aaKnown RBP12.05□□□□□ -0.48
GPC3-201ENST00000370818 GPR18Q14330 331 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 EXOC3L2Q2M3D2 409 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 FBXO42Q6P3S6 717 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 ABI3BPQ7Z7G0 1075 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 TSPYL5Q86VY4 417 aaPredicted RBP12.05□□□□□ -0.48
GPC3-201ENST00000370818 SFTPA2Q8IWL1 248 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 DTX3Q8N9I9 347 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 ZNF540Q8NDQ6 660 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 SETD9Q8NE22 299 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 SRFBP1Q8NEF9 429 aaKnown RBP12.05□□□□□ -0.48
GPC3-201ENST00000370818 GPR32P1Q8NGA4 272 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 OR10G2Q8NGC3 310 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 OR5D16Q8NGK9 328 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 UBE2FQ969M7 185 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 PIP5K1AQ99755 562 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 NDRG2Q9UN36 371 aaKnown RBP12.05□□□□□ -0.48
GPC3-201ENST00000370818 PCDHGA2Q9Y5H1 932 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 ENPP4Q9Y6X5 453 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 MDC1Q14676 2089 aaKnown RBP12.04□□□□□ -0.48
GPC3-201ENST00000370818 TEX51A0A1B0GUA7 166 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 PROM1O43490 865 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 SEMA7AO75326 666 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 OR12D1P0DN82 309 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 ALPPL2P10696 532 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 IGFBP4P22692 258 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 GPC1P35052 558 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 TSFMP43897 325 aaKnown RBP12.04□□□□□ -0.48
GPC3-201ENST00000370818 RFX2P48378 723 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 STXBP1P61764 594 aaKnown RBP12.04□□□□□ -0.48
GPC3-201ENST00000370818 RPS15AP62244 130 aaKnown RBP12.04□□□□□ -0.48
GPC3-201ENST00000370818 KIR2DS3Q14952 304 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 GPR19Q15760 415 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 SMN1Q16637 294 aaKnown RBP12.04□□□□□ -0.48
GPC3-201ENST00000370818 MICAQ29983 383 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 SLC48A1Q6P1K1 146 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 SZRD1Q7Z422 152 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 CCDC116Q8IYX3 515 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 SLC7A6Q92536 515 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 SLC22A18Q96BI1 424 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 ZCCHC3Q9NUD5 404 aaKnown RBP12.04□□□□□ -0.48
GPC3-201ENST00000370818 C2orf42Q9NWW7 574 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 ERVK13-1Q9NX77 482 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 PEX16Q9Y5Y5 336 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 CCDC85CA6NKD9 419 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 LEUTXA8MZ59 168 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 FFAR1O14842 300 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 CTSVO60911 334 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 IGLV3-19P01714 112 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 C8orf89P0DMQ9 161 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 UGT2B7P16662 529 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 NTSP30990 170 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 HMGA2P52926 109 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 LIM2P55344 173 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 SYPL1Q16563 259 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 GPAT3Q53EU6 434 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 CCNJQ5T5M9 372 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 Q6ZPB1 254 aaPredicted RBP12.04□□□□□ -0.48
GPC3-201ENST00000370818 CCDC190Q86UF4 302 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 LGI4Q8N135 537 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 HRASLS5Q96KN8 279 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 OR2A5Q96R48 311 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 BBS4Q96RK4 519 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 NIPSNAP1Q9BPW8 284 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 MAPKAP1Q9BPZ7 522 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 TREX2Q9BQ50 279 aaPredicted RBP12.04□□□□□ -0.48
GPC3-201ENST00000370818 OR51I1Q9H343 314 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 NUFIP1Q9UHK0 495 aaKnown RBP12.04□□□□□ -0.48
GPC3-201ENST00000370818 CYP8B1Q9UNU6 501 aa12.04□□□□□ -0.48
GPC3-201ENST00000370818 PNMA8CA0A1B0GUJ8 204 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 LOC110117498-PIK3R3F6TDL0 507 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 PRAMEF26H0Y7S4 382 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 PCDH17O14917 1159 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 TNFSF14O43557 240 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 SH3BP5O60239 455 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 PCDHGA12O60330 932 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 UGT2B17O75795 530 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 IFNW1P05000 195 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 CELA2BP08218 269 aaPredicted RBP12.03□□□□□ -0.48
GPC3-201ENST00000370818 RHCEP18577 417 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 GADD45AP24522 165 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 UQCRC1P31930 480 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 FEN1P39748 380 aaKnown RBP12.03□□□□□ -0.48
GPC3-201ENST00000370818 RABIFP47224 123 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 UGT2B15P54855 530 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 BTN3A2P78410 334 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 ILF3Q12906 894 aaKnown RBP eCLIP12.03□□□□□ -0.482e-7■■■■□ 20.5
GPC3-201ENST00000370818 IRF3Q14653 427 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 GANABQ14697 944 aaKnown RBP12.03□□□□□ -0.48
GPC3-201ENST00000370818 MAD2L1BPQ15013 274 aaPredicted RBP12.03□□□□□ -0.48
GPC3-201ENST00000370818 PUS10Q3MIT2 529 aaKnown RBP12.03□□□□□ -0.48
GPC3-201ENST00000370818 SPANXN2Q5MJ10 180 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 GPR153Q6NV75 609 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 TMEM64Q6YI46 380 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 ASPGQ86U10 573 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 CACTIN-AS1Q8N1I8 211 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 OR9Q2Q8NGE9 314 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 NT5CQ8TCD5 201 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 ZFAND1Q8TCF1 268 aa12.03□□□□□ -0.48
GPC3-201ENST00000370818 GPBAR1Q8TDU6 330 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms